Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g02301 ATGGCTGCGAAACGGTTTTTTGATGATTCTGATCAAGACAATAATAAGCCACCAGGCGATAAACGGATGAGAACTACACCAAGACCTTCTTTTGCTTCGGTAATAGGAGAAGTGGTGATGGTGAAAAACTTGCAGAACCTTTTCTCAGGCTTGGAGCCCTTGCTTAGAAGAGTGGTGAATGAAGAGGTGGAGCGAGTGATGAGGCATTGTACTGTGCCACGTACAATAAGTAGGTCCCCTTCGTTGAGGATCGAAGCAGCATCATTGGAGAAACCATCGAACTATGAACTCATGTTCAGCAAGAAGCTATTGGTCCCTATATTCACAGGAAGCAGAATAGTGGACATAGATGGGAACCCAATCCAGGTGATTCTGGTTGACAAAAGTGGCGGTGATGGTGAATTAGTAGCGGTTCCCACGAGTGTGCCCCAGCCCATAAAGCTAGAGATAGTGGTGCTTGATGGAGATTTTCCTAACAACAAGGAATCATGGACGACTGAGGAGTTCAACAACAACATAGTGAAGGAGAGAACGGGGAAGAGGCCATTGCTCACAGGAGAATTGAATCTGACCATGAGGGATGGGATTGCACCAATTGAAGAGATTGAGTTCACTGATAACTCTAGTTGGATACGAAGCAGGAAGTTCAGAGTTGCTGTTAGGGTGGCTCCAGGGAGTAATCACACTCTCCCAATTCGTCAAGGAATGACTGAGCCATTTGTTGTTAAGGATCACCGTGGTGAATTGTACAAGAAACATTACCCACCTAAGCTCAATGACGAAGTGTGGCGCCTAGAGAAGATTGGTAAAGACGGAGCTTTCCACAAAAAATTGTCCAAAGAGGGGATAAACAGCGTCCAAGACTTTCTCAAGTTATCCGTTGTTGATGTCCATAGGCTCAGAAAGATTTTGGGCGTTGGGATGTCAGAAAAAATGTGGGAAGTGACAATGAAGCATGCAAAGACTTGCGAGAAGGGCAACAAGTACTACGTGTACCGTGGGCCTAATTTTAGCGTCTTTCTGAATTCCATATGCCAGCTGGTTAGAGCTGATATCAACGGCCAAAGTTTTCCGAGTAGAGAGCGAAGCAACATGACCAGGAGCTATATGGAGAAATTGGTGAGAGAAGCATATGTTAGATGGAATGACTTGGAGGAAATTGATGCGGCTTTCTTAACCCAAGGTGAAACTTTGGAGCAATTTCCAAACAATCATCAAGCATCACTAATAGCATATGATCAGAACGACTATTTTGGTGATAAATCTGCCGAAGTTGGTAACTATGTACCAACCCATAATGCACAAATTGGATGCAGCGAGTGGGCAGTGAATGGAACATTTGGCACAACATCATTTGTGAATGGCATACCTTACAGCTTCTTAGATTCACAATCGGACAGTGACATAAGCCCCTCAGTTGATGGTGCCGCAAGGTGGCCTTAG 1443 0.4477 MAAKRFFDDSDQDNNKPPGDKRMRTTPRPSFASVIGEVVMVKNLQNLFSGLEPLLRRVVNEEVERVMRHCTVPRTISRSPSLRIEAASLEKPSNYELMFSKKLLVPIFTGSRIVDIDGNPIQVILVDKSGGDGELVAVPTSVPQPIKLEIVVLDGDFPNNKESWTTEEFNNNIVKERTGKRPLLTGELNLTMRDGIAPIEEIEFTDNSSWIRSRKFRVAVRVAPGSNHTLPIRQGMTEPFVVKDHRGELYKKHYPPKLNDEVWRLEKIGKDGAFHKKLSKEGINSVQDFLKLSVVDVHRLRKILGVGMSEKMWEVTMKHAKTCEKGNKYYVYRGPNFSVFLNSICQLVRADINGQSFPSRERSNMTRSYMEKLVREAYVRWNDLEEIDAAFLTQGETLEQFPNNHQASLIAYDQNDYFGDKSAEVGNYVPTHNAQIGCSEWAVNGTFGTTSFVNGIPYSFLDSQSDSDISPSVDGAARWP 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g02301 480 Pfam Calmodulin binding protein C-terminal domain 328 387 IPR046829 -
Gma05g02301 480 PANTHER OS02G0177800 PROTEIN 1 474 IPR012416 GO:0005516
Gma05g02301 480 Pfam Calmodulin binding protein central domain 258 323 IPR046830 -
Gma05g02301 480 MobiDBLite consensus disorder prediction 1 27 - -
Gma05g02301 480 Pfam Calmodulin binding protein-like N-terminal domain 95 245 IPR046831 -
Gma05g02301 480 PANTHER PROTEIN, PUTATIVE-RELATED 1 474 - -
Gma05g02301 480 MobiDBLite consensus disorder prediction 1 23 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g02301 Gma-Chr5 44026185 44030068 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g02301 3 392 Calmodulin-binding Proteins AT5G57580 47.980 2.67e-111 341
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g02301 - - gmx:100802257 964.526
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g02301 05 44026185 44030068 Gma05g02301 05 44026185 44030068 ECH