Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g02272 ATGAATTCCCCGCCTGATGACAACAATTCAGAACCTAGAGAGTTGGGCAGCCCGGATGCTAGTTCCAATGAAATTGAGAATTTTCTATCCTTATATGGTGAGGTGGAAGCCAAACATCGATTGCTTTTGGTTCAGTGGTTAACTAGTCTTGTCCCCTCATTGAACCTTCCAATAAATGTCACGGATGGTGAATTAAGAGCATGCTTGAGCAATGGTACAGTTTTGTGCCAGATACTGAACAAGCTACGACATGGTACCGTGAATGTGGTTAGTGAACCTGATAATTTTCTGCCATCACAATCAGAAAATGTTAAATCGTTTCTGAAAGCTTTGGACGGAATGGGATTGCCCCGGTTTGAAATATCCGACCTAGAGAAGGGGTCTATGAAAGCTGTTGTGGATTGTCTTTTAACACTTAGAGAGAAAAGTTTGCAGAATGCTTTGGGAGATAATATATCTGTAACTAATTCCAACACGGTGAGCCCTCATGGGAATGCACCATTCAATTTTCATTGTTCTCCAACATTTGGTGGAGAGCAGAGGAAGATTGCAGCTGGGTCGATGTTGCAACGTGTTAATAGTACCCCTATTATTATGGCAGAACCATCAGTTTCATTAATACACCATGTTGGTCATAAGTTTCATGAGGAGTTTCAACTGAAACCTGGGAGTTACGCAGATCTTCCTGCTGCAAAAATATCAGAAATGATGAAATCAAACAGTATAGATAATGCTCCCACTCAGTCTCTTCTGAGTGTTGTGAATGGTATTCTTGAAGAAAGTGTTGAAAGAAGAAATGGGGAAATACCTCATcgtgtggcatgcttgttgaaaaaggttacccaagagattgagcggcgcatgtcaactcaagcagaacatttgcgaactcaaaacaatcttttcaaggctcgggaagaaaaataccaatcgagaataagagtacttgaggcacttgcatctggaactagagatgagagtgagGGTGAGATGATCAAAGAGGAAGAAAAGAAGGTAGATGAGAATGAAGTTGTTAGGTTGATAAAAGAGCAGGAGGACAAAAATTTGGAAATTTCAGCTTTGAAGGTAGAACTGGAAACAGCCAAAAGAACATGTGAAGTACAATTCTCACAGTTGGAAGAAGAAGCCAACGGTTTTAAAGCAACATTGACACGGAAGGTCCAAGAATATGAGCATCAATTGGAAGAATTAAGAAATGAGGCTGAAAAGATCAAAGAGGAAGTAAAAACGACAGACGaAAAGGAAACTATTAGGATCATGAAAGAACAGGAGGACAAAAAATTAGAAATTTCATCATTGAAGAAAAAACTGGAAACAAAAAAAAAAACATATGAAGTAGAATGTTCACAGTTCGTAGAAGAAGCTAAAGATGCTAAACAGAAGGCCCAAGAATATGAGAATCAATTGAAAGCATTAAGAAATAAGGTTGAAAAGATCAAAGAGGAGGTAAAAACGGAAAATGAAAACGAAATTGTTAGGTTGATGAAAGAACAAGAGGACAAAAATTTGGAAATTTCAGCATTAAAGCAAGAACTAGAAAAAACCAAAAGAACATATGAAGTACAACGTTCACAGTTGGAAACAGAAGCTAAGGATGCTAAAGTAGAATTAACTCAAAAGTCTCGAGAATATGAGCACCGATTGGAAGAATTAAGAAATAAGATTAAGGAGCTTGAGGTTTCTTCTGATTCAAAAGATCAGAAGTGGAACATGAAAATGAACCAAATACAGACTGTTATAAACTTTCAATTGAGTTCCCTACAGAAATTGGAATTATCTTGGGAATGCATTAAGCAAAATGTTATGAAAGAGCAAACGGTTTATGCAGAGGATTGTGATCGGTTAGGTGTTTATCTTAAACCGCTGTTACATGCAGCTGAGAACTACCATACTCTTCTTGCTGAAAATCAAAAAATGTTTAATGAGATTCAAGAATTAAAAGGAAATATCAGAGTATATTGTCGAATTAGACCATTTCTTTCAGGCAAAAAGGAAAAACAATCTATTGTTAAACTCATTGGTGAAAATGATTTGGTTGTGGCAAATCCATCCAAAGAAGGAAAAGATGCTCTTCGATCATTTAAATTTAACAAGGTTTTCGGCTCTGCCACAACTCAAGCGGAGGTATACTCTGACATTCAATCCTTTATAAGATCAGTTCTAGATGGGTATAATGTGTGTATATTTGCTTATGGCCAAACTGGTTCAGGGAAAACTTATACAATGACTGGTCCAAATGGGGCAACAAGCGAGACTATTGGTGTTAATTATCGAGCTCTAAATGACCTCTTCAAGATTGCCACAAGTAGAGAAAGCCTCATGGACTACGAGATTGGAGTTCAAATGGTTGAGATATATAATGAGCAAGTCCGTGACTTGTTAATAACAGATGCAGTACCAGATGCTAGCTTGTTTCCTGTGAAATCGCCTTCAGATGTAATTAAGCTAATGGACATTGGACTTAAAAATAGAGCCATTGGTGCAACTGCTATGAATGAAAGAAGTAGCCGTTCTCACAGTGTTGTCTCAATTCATATTCGTGGGAAGGACTTGAAGACTGGTTCTACTATGGTTGGTAATCTTCATTTGGTAGATTTGGCAGGAAGTGAAAGGGTAGATCGGTCTGAAGTAACTGGGGATAGGCTTAAGGAAGCACAACATATAAACAGATCACTATCTGCCCTTGGAGATGTTATTTTTGCCCTTTCTCAAAAAAGCCCCCATGTACCATACAGAAACAGCAAACTTACTCAACTTCTACAAACTTCTCTTGGTGACCAAGCGAAGACACTCATGTTTGTTCAAATTAATTCAGACGTAAGTTCATATTCTGAAACACTGAGCACTTTAAAGTTTGCTGAAAGGGTTTCTGGAGTTGAATTAGGAGCTGCACGAAGTAGCAAAGAGAGCAAAGATGTGAGAGAATTAATGGAACAGGTGTCTTCTTTGAAGAACGCTATTTTTGCAAAAGAGGAGGAGATTGAGAGGCTTCAATTACTCAAAGGTTCAGTTGGTAGCATTGTTAAGCGAAACCAAATTTCACGAAGTAGAAGTATTAAGCACTATGAAGCTTTTAACCAGCAACCGATGGATGACCATATACACCAAAATGAATTTCTCCATCAATCTGAACTTCATGAGGGAAATATAGGAAAGAATATTGCTGCAATTGCAGAAACTTCAAGATTTACAGATTCTGATTTTGATGAAAAATCAAGTGATCTTTCTGACAGTGCTGTTGCTCCAGGCACAGAAACTGACGGTTCAGAAAATTCTAGTCTCACCGAACGCACAACATCATCAGATAAGAGATCTAAACCAATTCGCAAAACTATTCAAGTGATGAGGAAATTAAACCGAACTTCATCTATCGCGACCACCCCAGTAAAGGACCCCTTGAAGAAGTCACCAGGTATAAAAAAGAGCGTCAGTATAGGCAACCTTAAACCTCCAAAACTGTGGAAGTAA 3489 0.3606 MNSPPDDNNSEPRELGSPDASSNEIENFLSLYGEVEAKHRLLLVQWLTSLVPSLNLPINVTDGELRACLSNGTVLCQILNKLRHGTVNVVSEPDNFLPSQSENVKSFLKALDGMGLPRFEISDLEKGSMKAVVDCLLTLREKSLQNALGDNISVTNSNTVSPHGNAPFNFHCSPTFGGEQRKIAAGSMLQRVNSTPIIMAEPSVSLIHHVGHKFHEEFQLKPGSYADLPAAKISEMMKSNSIDNAPTQSLLSVVNGILEESVERRNGEIPHRVACLLKKVTQEIERRMSTQAEHLRTQNNLFKAREEKYQSRIRVLEALASGTRDESEGEMIKEEEKKVDENEVVRLIKEQEDKNLEISALKVELETAKRTCEVQFSQLEEEANGFKATLTRKVQEYEHQLEELRNEAEKIKEEVKTTDEKETIRIMKEQEDKKLEISSLKKKLETKKKTYEVECSQFVEEAKDAKQKAQEYENQLKALRNKVEKIKEEVKTENENEIVRLMKEQEDKNLEISALKQELEKTKRTYEVQRSQLETEAKDAKVELTQKSREYEHRLEELRNKIKELEVSSDSKDQKWNMKMNQIQTVINFQLSSLQKLELSWECIKQNVMKEQTVYAEDCDRLGVYLKPLLHAAENYHTLLAENQKMFNEIQELKGNIRVYCRIRPFLSGKKEKQSIVKLIGENDLVVANPSKEGKDALRSFKFNKVFGSATTQAEVYSDIQSFIRSVLDGYNVCIFAYGQTGSGKTYTMTGPNGATSETIGVNYRALNDLFKIATSRESLMDYEIGVQMVEIYNEQVRDLLITDAVPDASLFPVKSPSDVIKLMDIGLKNRAIGATAMNERSSRSHSVVSIHIRGKDLKTGSTMVGNLHLVDLAGSERVDRSEVTGDRLKEAQHINRSLSALGDVIFALSQKSPHVPYRNSKLTQLLQTSLGDQAKTLMFVQINSDVSSYSETLSTLKFAERVSGVELGAARSSKESKDVRELMEQVSSLKNAIFAKEEEIERLQLLKGSVGSIVKRNQISRSRSIKHYEAFNQQPMDDHIHQNEFLHQSELHEGNIGKNIAAIAETSRFTDSDFDEKSSDLSDSAVAPGTETDGSENSSLTERTTSSDKRSKPIRKTIQVMRKLNRTSSIATTPVKDPLKKSPGIKKSVSIGNLKPPKLWK 1162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g02272 1162 Coils Coil 636 656 - -
Gma05g02272 1162 PANTHER KINESIN-LIKE PROTEIN KLP-3 2 336 - -
Gma05g02272 1162 PANTHER KINESIN-LIKE PROTEIN KLP-3 350 429 - -
Gma05g02272 1162 ProSiteProfiles Calponin homology (CH) domain profile. 37 144 IPR001715 GO:0005515
Gma05g02272 1162 Pfam Calponin homology (CH) domain 42 141 IPR001715 GO:0005515
Gma05g02272 1162 PANTHER KINESIN MOTOR CATALYTIC DOMAIN PROTEIN 350 429 - -
Gma05g02272 1162 MobiDBLite consensus disorder prediction 1084 1103 - -
Gma05g02272 1162 PANTHER KINESIN-LIKE PROTEIN KLP-3 433 488 - -
Gma05g02272 1162 MobiDBLite consensus disorder prediction 1 21 - -
Gma05g02272 1162 SMART kinesin_4 654 974 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma05g02272 1162 Gene3D - 32 145 IPR036872 -
Gma05g02272 1162 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 656 1004 IPR027417 -
Gma05g02272 1162 Coils Coil 980 1007 - -
Gma05g02272 1162 MobiDBLite consensus disorder prediction 1072 1162 - -
Gma05g02272 1162 PANTHER KINESIN MOTOR CATALYTIC DOMAIN PROTEIN 503 1162 - -
Gma05g02272 1162 PANTHER KINESIN MOTOR CATALYTIC DOMAIN PROTEIN 433 488 - -
Gma05g02272 1162 ProSiteProfiles Kinesin motor domain profile. 656 966 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma05g02272 1162 PANTHER KINESIN MOTOR CATALYTIC DOMAIN PROTEIN 2 336 - -
Gma05g02272 1162 SMART ch_5 39 142 IPR001715 GO:0005515
Gma05g02272 1162 PANTHER KINESIN-LIKE PROTEIN KLP-3 503 1162 - -
Gma05g02272 1162 MobiDBLite consensus disorder prediction 1122 1136 - -
Gma05g02272 1162 Coils Coil 498 575 - -
Gma05g02272 1162 SUPERFAMILY Calponin-homology domain, CH-domain 36 143 IPR036872 -
Gma05g02272 1162 Coils Coil 351 382 - -
Gma05g02272 1162 Coils Coil 387 421 - -
Gma05g02272 1162 Gene3D - 340 380 - -
Gma05g02272 1162 Gene3D - 417 459 - -
Gma05g02272 1162 Gene3D - 492 534 - -
Gma05g02272 1162 Gene3D Kinesin motor domain 651 1007 IPR036961 -
Gma05g02272 1162 Pfam Kinesin motor domain 662 964 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma05g02272 1162 PRINTS Kinesin heavy chain signature 730 751 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma05g02272 1162 PRINTS Kinesin heavy chain signature 836 853 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma05g02272 1162 PRINTS Kinesin heavy chain signature 867 885 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma05g02272 1162 PRINTS Kinesin heavy chain signature 916 937 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma05g02272 1162 Coils Coil 427 496 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g02272 Gma-Chr5 43755437 43764106 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g02272 390 966 Calmodulin-binding Proteins AT5G65930 32.222 5.53e-67 245
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g02272 K10406 - aprc:113855795 1591.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g02272 05 43755437 43764106 Gma05g02272 05 43755437 43764106 ECH
Gma05g02272 05 43755437 43764106 Gma08g00396 08 3336653 3345121 GST
Gma05g02272 05 43755437 43764106 Gma09g01705 09 42697473 42702630 PCT
Gma09g01705 09 42697473 42702630 Gma05g02272 05 43755437 43764106 PCT