Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g02265 ATGGTTGGTGACACTGTGATTACTGGTAGTGATGATTGGACGGCAAGAGTATGGTCTGTTTCTCGAGGAACATGTGATACTGTCTTAGCATGCCATGCTGGACCAATATTATGTGTTGAGTATTCTTCTTTAGATAGAGGAATAATTACAGGGTCCACTGATGGCCTGCTACGTTTTTGGGAAAATGATGATGGAGGCATACATTGTGCAAAAAATGTTACAATTCACAATGCTGCCATATTATCTATCAATGCTGGGGAGCACTGGTTAGGCATTGGAGCAGCTGATAATTCTTTGTCACTCTTTCACCGGCCCCAAGAAAGACTTGGTGGTTTTTCTGGCACTGGGTCCAAGATGGCTGATTGGCAGCTTTACAGAACACCACAGAAAACAGTTGCTATGGTTAGATGTGTTGCTTCAGACTTGGAAAGGAAAAGGATATGCAGCGGTGGTCGCAATGGGCTTCTAAGGCTGTGGGATGCAACTATTAATATTTGA 498 0.4337 MVGDTVITGSDDWTARVWSVSRGTCDTVLACHAGPILCVEYSSLDRGIITGSTDGLLRFWENDDGGIHCAKNVTIHNAAILSINAGEHWLGIGAADNSLSLFHRPQERLGGFSGTGSKMADWQLYRTPQKTVAMVRCVASDLERKRICSGGRNGLLRLWDATINI 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g02265 165 Pfam WD domain, G-beta repeat 24 60 IPR001680 GO:0005515
Gma05g02265 165 PRINTS G protein beta WD-40 repeat signature 48 62 IPR020472 -
Gma05g02265 165 PRINTS G protein beta WD-40 repeat signature 147 161 IPR020472 -
Gma05g02265 165 PRINTS G protein beta WD-40 repeat signature 6 20 IPR020472 -
Gma05g02265 165 ProSiteProfiles Trp-Asp (WD) repeats profile. 29 61 IPR001680 GO:0005515
Gma05g02265 165 SUPERFAMILY WD40 repeat-like 3 160 IPR036322 GO:0005515
Gma05g02265 165 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 29 61 - -
Gma05g02265 165 Gene3D - 2 164 IPR015943 GO:0005515
Gma05g02265 165 PANTHER C-MYC PROMOTER BINDING PROTEIN 1 165 - -
Gma05g02265 165 SMART WD40_4 66 103 IPR001680 GO:0005515
Gma05g02265 165 SMART WD40_4 22 61 IPR001680 GO:0005515
Gma05g02265 165 SMART WD40_4 121 160 IPR001680 GO:0005515
Gma05g02265 165 ProSitePatterns Trp-Asp (WD) repeats signature. 147 161 IPR019775 -
Gma05g02265 165 PANTHER DENN DOMAIN-CONTAINING PROTEIN 3 1 165 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g02265 Gma-Chr5 43688440 43690027 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g02265 3 161 Eukaryotic Initiation Factors Gene Family AT2G46290 22.892 6.93e-06 43.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g02265 05 43688440 43690027 Gma05g02265 05 43688440 43690027 ECH