Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g02256 ATGATGGTGATGAAGAAGGAAGCAACATACTCCTCCATTCTCACACTCCTCATTGCCACACTCTCCCTAGCCCTCTCCGACGAGTTCGGCGACAGAGGAGAGAATGTCACCGTTGACCCTTCTCTTGTCTTCCAAAATGACCGTCTCAGAAACGCTTATATAGCCTTGCAAGCTTGGAAGCAAGCCATTTTGTCTGATCCCCGCAACCAGACAACCGATTGGGTTGGATCCCAAGTGTGCAGCTACACCGGAGTGTACTGTGCTCCCGCGCTGGACAACCCCAATATCCGTACCGTAGCCGGCATTGATCTCAACCATGGTGACATTGCCGGTTATTTACCCCAAGAGCTCGGTTTGCTGGTGGATCTTGCACTCTTCCACATCAACTCAAATAGATTCTGCGGCACCGTGCCGCACAAGTTCGATAGGTTGAAACTGCTCTACGAACTGGATCTCAGTAACAACAGGTTCGCAGGAAAGTTCCCTGAGGTGGTTCTGCGTCTTCCGTCACTCAAGTTCTTGGATCTCAGGTTCAACGAATTCGAAGGTACGGTGCCGAGAGAGTTGTTCGATAAGGACCTGGACGCCATTTTCATCAACGACAACCGTTTCGTCTTTGATCTTCCGGACAACTTGGGCAACTCGCCGGTCTCCGTCATCGTCCTCGCCAACAACAGATTCCACGGCTGCATTCCGGCCAGCTTGGGGAACATGTCTAACTTGAACGAAATCATCTTGATGAACAATGCATTCCGATCGTGCTTGCCTTCGGAGATTGGGCTTCTGAAGAACCTGACGGTGTTCGACGTCAGCTTTAATCAACTTCTTGGTCCCTTACCGAACGCCGTTGGAAACGCCGTCAGCTTGGAGCAGCTCAATGTGGCGCATAACTTACTCTCAGGTCAAATTCCAGCCAGCATTTGTATGCTGCCTCACCTTCAGAACTTCACTTATTCCTTTAACTTCTTCACTAGTGAGCCTCCCGCATGTCTCGCATTGCCAGCGTTTGACGACAGGCTCAACTGCTTACCGGCAAGGCCGGCGCAGAGGCCTCCGCCGCAATGTAAGTCGTTCTTCTCTAAACCTGTGGACTTACCACCTGTTCATAGTCCTTCTCCAGGGTATTTGCCACCGCCGCCACATTCTTCCCCTATACCACCTGTGTACCCTCCACAACATTCTCCACCTTCACATACTCCAAAGCCACCTCCATCAAATTCACCATCGCCCCCTTCTCCCCCCCATCACTCACCCGCACAACCTGTTTATCCTTATTTATCACCTCCACCACCACCTTCACCGCCTTGTATAGAACTTCCTCCACCCCCTCCCCAATCTACACCTTCTCCCACACCTTACCTCCCACCACCATCTCCTTCTCCTCCTCCGCCACCAGTGTATGTTTCTCCACCACCACCACCACCAGTTCAATACAGTTCGCCGCCCCCACCGGTATACCATTCACCGCCTCCGTGCGAAACTCCACCTTCAGTTTCTCCGCCCCCACCACCCGCCCCTGTATATGAAGGGCCATTGCCACCTATCGTTGGACTCCCGTACGCGTCGCCCCCACCACCACCCTTTTATTGA 1590 0.527 MMVMKKEATYSSILTLLIATLSLALSDEFGDRGENVTVDPSLVFQNDRLRNAYIALQAWKQAILSDPRNQTTDWVGSQVCSYTGVYCAPALDNPNIRTVAGIDLNHGDIAGYLPQELGLLVDLALFHINSNRFCGTVPHKFDRLKLLYELDLSNNRFAGKFPEVVLRLPSLKFLDLRFNEFEGTVPRELFDKDLDAIFINDNRFVFDLPDNLGNSPVSVIVLANNRFHGCIPASLGNMSNLNEIILMNNAFRSCLPSEIGLLKNLTVFDVSFNQLLGPLPNAVGNAVSLEQLNVAHNLLSGQIPASICMLPHLQNFTYSFNFFTSEPPACLALPAFDDRLNCLPARPAQRPPPQCKSFFSKPVDLPPVHSPSPGYLPPPPHSSPIPPVYPPQHSPPSHTPKPPPSNSPSPPSPPHHSPAQPVYPYLSPPPPPSPPCIELPPPPPQSTPSPTPYLPPPSPSPPPPPVYVSPPPPPPVQYSSPPPPVYHSPPPCETPPSVSPPPPPAPVYEGPLPPIVGLPYASPPPPPFY 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g02256 529 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 24 432 - -
Gma05g02256 529 Gene3D Ribonuclease Inhibitor 51 216 IPR032675 -
Gma05g02256 529 Pfam Leucine rich repeat N-terminal domain 55 87 IPR013210 -
Gma05g02256 529 MobiDBLite consensus disorder prediction 369 516 - -
Gma05g02256 529 SUPERFAMILY L domain-like 54 334 - -
Gma05g02256 529 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 24 432 - -
Gma05g02256 529 PRINTS Proline rich extensin signature 365 377 - -
Gma05g02256 529 PRINTS Proline rich extensin signature 379 395 - -
Gma05g02256 529 PRINTS Proline rich extensin signature 424 445 - -
Gma05g02256 529 PRINTS Proline rich extensin signature 401 413 - -
Gma05g02256 529 Gene3D Ribonuclease Inhibitor 217 342 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g02256 Gma-Chr5 43590336 43592369 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g02256 476 529 Trihelix Transcription Factor Family AT4G18670 59.259 6.26e-06 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g02256 - - gmx:100782090 709.523
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g02256 05 43590336 43592369 Gma05g02256 05 43590336 43592369 ECH
Gma05g02256 05 43590336 43592369 Gma08g00377 08 3159317 3162615 GST