Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g02255 ATGTTCTTGTCTTTGCATATAGTCCTAATTAATCATATTGCAACATTCCACTTACCGACACCATCTCTACGACAACCTCCTTTCTCTCTATCTCTAGCTCCGATGAGTGCTCTCTCTAACTCCAGTAGTAGCCACGGCAATTCCTTCCTCAAGATGCCCGCCATCAAGTTTACCAAGCTCTTCATCAATGGAGATTTTGTTGATTCCATATCAGGAAGGACATTTGAGACTATAGACCCCAGAAAAGAAGAGGTAATTGCAAGAGTTAGTGAGGGAGATAAAGAAGACATTGATATTGCTGTTAAAGCAGCACGTCAGGCATTTGACTCGGGTCCATGGCCTCGCTTGCCAGGCTCTgaaagggcaaaaattatgatgaaatgggcagacctagttgatgaaaatatagaagaactagcagcattagataccattgatgctggaaagctatactatattaataaggtagcggaaattccttcagctacaaatgcgttacggtactatgcaggtgctgctgataaaattcacggtgacgtattaaaaatgaacggggatttccatgcttatacacttttggaaccaattggtgttgtgggacacataattccatggaatgcccccagcctctcatttttcatcaaggttagcccttccttagctgcaggctgtactatggtcctcaaacctgctgaacaaacacccctctctgctttgttttatgctcatctagctaagttggctggaatcccagatggtgtgcttaatatagtacctggatttggcccaactgctggcgcagcaataagctcacacatggacatagatgcggtcagttttactggttcaattgaagtagggcgtgaagtgttgcaggctgcagcttggagcaatttaaaaccggtttcacttgaattaggaggcaagtctcCTCTCATTATTTTCAATGATGCGGATATAGACAAAGCTTCCGAGCTTGCTCTCTTTGGCATCATGTCTAACAAGGGAGAAATTTGTGTGGCAGGTTCTCGTGTGTTTGTCCAGGAAGAGATCTATGATGAATTTGAGAAGAAGTTGGTGGAGAAGGCAAAATCTTGGGTCGTTGGGGATCCTTTTGATCCCAAATCGCTGCAAGGGCCTCAGGCTGACAGGAACCAATTGGAGAAAATACTTTCATATATTGAGCACGGAAAGAGAGAAGGAGCCACCCTTTTGACAGGAGGTAATACAGTGGGCAACAAAGGTTACTACATAGAACCTACAATTTTCTCCAATGTAAAGGAGGACATGCTAATAGCACGGGAAGAAATATTTGGCCCTGTACTAGCGCTGATGAAGTTTAAGACCATGGAGGAAGCAATTAAAAGTGCTAACAATACCAAGTATGGCCTAGCAGCAGGAATTGTAACCAAGAATTTGGATACTGCAAACACTATGTCAAGGTCCATTCGTGCAGGCATTGTTTGGATCAACTGCTATTTTACCGTAGGGAGTGATGTTCCTTTTGGAGGGTATAAGATGAGCGGATTTGGAAGAGATTTGGGATTACAGGCCCTTCACAAGTACTTACAAGTTAAATCTGTTGTAACACCTATTCATAATTCTCCTTGGCTTTGA 1617 0.2764 MFLSLHIVLINHIATFHLPTPSLRQPPFSLSLAPMSALSNSSSSHGNSFLKMPAIKFTKLFINGDFVDSISGRTFETIDPRKEEVIARVSEGDKEDIDIAVKAARQAFDSGPWPRLPGSERAKIMMKWADLVDENIEELAALDTIDAGKLYYINKVAEIPSATNALRYYAGAADKIHGDVLKMNGDFHAYTLLEPIGVVGHIIPWNAPSLSFFIKVSPSLAAGCTMVLKPAEQTPLSALFYAHLAKLAGIPDGVLNIVPGFGPTAGAAISSHMDIDAVSFTGSIEVGREVLQAAAWSNLKPVSLELGGKSPLIIFNDADIDKASELALFGIMSNKGEICVAGSRVFVQEEIYDEFEKKLVEKAKSWVVGDPFDPKSLQGPQADRNQLEKILSYIEHGKREGATLLTGGNTVGNKGYYIEPTIFSNVKEDMLIAREEIFGPVLALMKFKTMEEAIKSANNTKYGLAAGIVTKNLDTANTMSRSIRAGIVWINCYFTVGSDVPFGGYKMSGFGRDLGLQALHKYLQVKSVVTPIHNSPWL 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g02255 538 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 39 538 - -
Gma05g02255 538 PANTHER CYTOSOLIC ALDEHYDE DEHYDROGENASE RF2C 39 538 - -
Gma05g02255 538 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 62 526 IPR016162 GO:0016491
Gma05g02255 538 SUPERFAMILY ALDH-like 50 533 IPR016161 GO:0016491
Gma05g02255 538 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 308 497 IPR016163 GO:0016620
Gma05g02255 538 Pfam Aldehyde dehydrogenase family 67 528 IPR015590 GO:0016491
Gma05g02255 538 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 304 311 IPR029510 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g02255 Gma-Chr5 43577721 43583386 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g02255 41 538 Aldehyde Dehydrogenase Gene Family AT3G24503 68.337 0.0 723
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g02255 K12355 - gmx:100527654 1038.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g02255 05 43577721 43583386 Gma08g00376 08 3147829 3152925 GST
Gma05g02255 05 43577721 43583386 Gma07g00791 07 8385503 8392751 PCT
Gma05g02255 05 43577721 43583386 Gma09g01754 09 43151795 43159374 PCT
Gma07g00791 07 8385503 8392751 Gma05g02255 05 43577721 43583386 PCT
Gma09g01754 09 43151795 43159374 Gma05g02255 05 43577721 43583386 PCT