Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g02246 ATGTTCCGATCCTCATTCGGGTCGTGCAGGACTCGTAACCTAACCGATGTAATGGAAAAAGCGGTGTTTGCACCACCCAACCCCATCGAAGTCGAACCACCCTCCCCCAAAACCATCAACAACACTTGCATCCTGTCGTTTAAGGATTCTCTTCCCAGGCGCAAAATCTCGGAGTGGTCATCACCTTTTGTCTTGGGTGGCGGCAGCAAAAACAAAAACAACAACCTCAACCTTAACCTCGGTGTCATGTCGTGCCCACCCACTTCCTCAAACATTTCCCTCAACACAGTCCACGAACAAGATTTCGGTTACGACGACAAAAAGAAGGTTTCAACGAAAAACTCGAGGACCaagaagaagaagaagaagaagaagaagaGACGTGCCCAGAACAAAAGGGAGTTTTTCCCTTTCAATTCATGCGCCAGAGACACCAACTTTGGTGGATACTGGTGGTATAGCAGCGACGAAGACGACGAAACCGACACCCTTTTCTCCTCCAAAAGCCTCTCCTCGGATTCCTCACGCTCGCGGCGCCGATGCCGGCGCCGCGAAAATGACCGGAGCTCCGACATGGGTGTTCTGCCGCTGCACGGGAAGGTGAAGGACACGTTCGCGGTGGTGAAGCGCTCCAGCGACCCTTACAGTGATTTCAGGACTTCGATGCTCGAAATGATCGTCGAGAAGCAGATTTTTTCGCCCGCGGATTTGGAGAATCTCTTGCAGTGTTTTCTGTCGCTGAATTCGCATCACCACCATAAGATCATTGTCCATGTCTTCACCGAGATTTGGGAGGCTCTGTTCTCTGACTGGTTTTGA 819 0.4969 MFRSSFGSCRTRNLTDVMEKAVFAPPNPIEVEPPSPKTINNTCILSFKDSLPRRKISEWSSPFVLGGGSKNKNNNLNLNLGVMSCPPTSSNISLNTVHEQDFGYDDKKKVSTKNSRTKKKKKKKKKRRAQNKREFFPFNSCARDTNFGGYWWYSSDEDDETDTLFSSKSLSSDSSRSRRRCRRRENDRSSDMGVLPLHGKVKDTFAVVKRSSDPYSDFRTSMLEMIVEKQIFSPADLENLLQCFLSLNSHHHHKIIVHVFTEIWEALFSDWF 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g02246 272 Pfam Transcriptional repressor, ovate 211 268 IPR006458 -
Gma05g02246 272 MobiDBLite consensus disorder prediction 105 130 - -
Gma05g02246 272 ProSiteProfiles OVATE domain profile. 207 266 IPR006458 -
Gma05g02246 272 MobiDBLite consensus disorder prediction 173 191 - -
Gma05g02246 272 MobiDBLite consensus disorder prediction 113 130 - -
Gma05g02246 272 PANTHER OS01G0226700 PROTEIN 56 270 - -
Gma05g02246 272 MobiDBLite consensus disorder prediction 164 193 - -
Gma05g02246 272 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 205 268 IPR006458 -
Gma05g02246 272 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 56 270 IPR038933 GO:0045892
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g02246 Gma-Chr5 43505939 43506757 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Gma05g02246 Ovate 2.2e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g02246 - - gmx:100819861 472.241
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g02246 05 43505939 43506757 Gma08g00367 08 3081021 3082190 GST