Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g02221 ATGGCTGGTGGAGGAGTAGAAAGTGGAGTGCCAGGGAAAAGGGCTCATCTTTACGAGCACAAGTTCAATGGCTATTTCTTATACACATGCTTGGTTGGTGCCCTTGGTGGTTCTCTCTTTGGCTATGATCTTGGTGTTTCAGGTGGGGTGACTTCAATGGATGATTTCCTGAAGGAATTCTTCCCAAATGTGTACAGAAGGAAGCAGATGCATCTGCATGAAACAGACTATTGTAAATATGACGACCAAGTGCTGACACTGTTTACATCATCTCTTTATTTCTCAGCACTGGTCATGACATTCTTTGCTTCCTTTTTGACAAGAAAGAAGGGAAGAAAGGCCAGTATCATTGTGGGAGCCCTTAGCTTCCTGGCTGGGGCAATCCTCAATGCTGCAGCCAAGAACATTGCAATGCTAATTATTGGCAGAGTCCTTCTTGGTGGAGGCATTGGATTTGGCAACCAAGCTGTTCCATTGTATCTTTCAGAAATGGCTCCAGCTAAGAACCGAGGAGCAGTGAACCAACTGTTTCAGTTCACAACTTGTGCTGGAATCTTAATTGCAAACCTAGTGAATTACGCTACTGCAAAACTCCATCCCTATggatggaggatatctctgggtttggcaggttttccagcatttgcaatgcttgttggaggtattttgtgtgctgagacaccaaacagccttgtggagcaaggaaggttggataaagcaaaagaagtattgcagagaattagaggtaccgagaacgtcgaagctgaatttgaggatcttaaagaagccagtgaagaagcacaagccgtgaagagcccatttaggacactcctcaagaggaagtacaggccacaactgatcatAGGTGCCTTGGGGATTCCAGCAttccagcaactgactggaaataactccatcctcttctatgccccagtcattttccagagcttggggtttggtgccaatgcttcactgttttcatcttttatcaccaatggggctcttcttgttgccactgtcatctcaatgtttttggttgacaagtttggtagaagaaaattctttctggaagctggatttgaaatgatcTGCTGCATGATTATTACAGGTGCAGTTTTGGCAGTGGACTTTGGACACGGCAAAGAACTTGGGAGAGGACCCCCTCCGCCAGTCTGGCACCTTCCTCCAAGCCCTCCACTTCCCCAACTCGGACGTCGCTGGTTGATCCTCACCACCAAGTAA 1239 0.2954 MAGGGVESGVPGKRAHLYEHKFNGYFLYTCLVGALGGSLFGYDLGVSGGVTSMDDFLKEFFPNVYRRKQMHLHETDYCKYDDQVLTLFTSSLYFSALVMTFFASFLTRKKGRKASIIVGALSFLAGAILNAAAKNIAMLIIGRVLLGGGIGFGNQAVPLYLSEMAPAKNRGAVNQLFQFTTCAGILIANLVNYATAKLHPYGWRISLGLAGFPAFAMLVGGILCAETPNSLVEQGRLDKAKEVLQRIRGTENVEAEFEDLKEASEEAQAVKSPFRTLLKRKYRPQLIIGALGIPAFQQLTGNNSILFYAPVIFQSLGFGANASLFSSFITNGALLVATVISMFLVDKFGRRKFFLEAGFEMICCMIITGAVLAVDFGHGKELGRGPPPPVWHLPPSPPLPQLGRRWLILTTK 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g02221 412 Coils Coil 250 270 - -
Gma05g02221 412 SUPERFAMILY MFS general substrate transporter 20 371 IPR036259 -
Gma05g02221 412 Gene3D MFS general substrate transporter like domains 13 387 IPR036259 -
Gma05g02221 412 ProSiteProfiles Major facilitator superfamily (MFS) profile. 29 412 IPR020846 GO:0022857
Gma05g02221 412 TIGRFAM SP: MFS transporter, sugar porter (SP) family 23 373 IPR003663 GO:0016020|GO:0022857|GO:0055085
Gma05g02221 412 PRINTS Sugar transporter signature 37 47 IPR003663 GO:0016020|GO:0022857|GO:0055085
Gma05g02221 412 PRINTS Sugar transporter signature 297 307 IPR003663 GO:0016020|GO:0022857|GO:0055085
Gma05g02221 412 PRINTS Sugar transporter signature 140 159 IPR003663 GO:0016020|GO:0022857|GO:0055085
Gma05g02221 412 Pfam Sugar (and other) transporter 30 372 IPR005828 GO:0016021|GO:0022857|GO:0055085
Gma05g02221 412 CDD MFS_STP 32 385 IPR044778 GO:0015145|GO:0015749
Gma05g02221 412 PANTHER MAJOR FACILITATOR, SUGAR TRANSPORTER, MAJOR FACILITATOR SUPERFAMILY-RELATED 1 385 - -
Gma05g02221 412 PANTHER SOLUTE CARRIER FAMILY 2, FACILITATED GLUCOSE TRANSPORTER 1 385 IPR045262 GO:0015144
Gma05g02221 412 ProSitePatterns Sugar transport proteins signature 1. 341 358 IPR005829 GO:0016021|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g02221 Gma-Chr5 43280730 43285187 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g02221 1 385 Organic Solute Cotransporters AT4G02050 55.181 7.10e-152 438
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g02221 K24193 - gmx:100781006 749.584
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g02221 05 43280730 43285187 Gma05g02221 05 43280730 43285187 ECH
Gma05g02221 05 43280730 43285187 Gma08g00340 08 2860948 2863955 GST
Gma09g01804 09 43617186 43627646 Gma05g02221 05 43280730 43285187 PCT