Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g02210 ATGATTTCCATTGCTGCAACCTCTGGTTTTATTTATTTGCTGGAGCTTCCCAACGACAACATCGTCCTCCTCCACGGTGATGAGCCTAGCCTTGTTCCTCGGCCACCAACATGCCCTTTGCAGATCCTGCATGGGTTCTATTTTGTTTCTTGGTGGGTTGCGAAAATGGTGTTGACGCAACATGCAGTGGGGGCAGTGACGGGAAAAGAGCAACAACAATATTGCGGTGATGACACTGTCCAACAATTTCATAGAATCACGGCGTCTATCCGCAGCGTGGAAGACTTTCGTGTCGAACTTGCCGACGTGACGACGGATGATGTTTGCATGGATGGGGAAAACAAACAAGTCCCGTGCGGCCACGTGTACCACTCAAACTGCATCACCCTCTGGTTCGAGCACTGTAACTCTTGCCCCCTTTTCTAA 426 0.5 MISIAATSGFIYLLELPNDNIVLLHGDEPSLVPRPPTCPLQILHGFYFVSWWVAKMVLTQHAVGAVTGKEQQQYCGDDTVQQFHRITASIRSVEDFRVELADVTTDDVCMDGENKQVPCGHVYHSNCITLWFEHCNSCPLF 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g02210 141 SUPERFAMILY RING/U-box 109 140 - -
Gma05g02210 141 Pfam Ring finger domain 116 140 IPR001841 -
Gma05g02210 141 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 61 141 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g02210 Gma-Chr5 43195276 43200532 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g02210 79 140 C3H Transcription Factor Family AT3G60080 33.871 5.06e-06 42.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g02210 - K22378 gmx:102669154 78.5666