Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g02208 ATGGACGAGGACGAGCAACTCGAACGATTCGACTCGGAGTTCGCGTCCACGAGTTCCATTTCCTCCACGCTCAGCACCGACGATTTCCGGAACCTCACCAGCTCCGGTGACATTTCCTCCATCAGCAGCGGCTCCGGCGAGATTCCTCCCGTCTCGGTCCTCGCGCCACCTTTTCTCCACTGCGAGGGGTCCAATGACGGCGAGACGGCGGCGGCAAGGGAGAAGTGCGTGGGAAGGAGTAACAAGGGAGTGAGCTGGGGACACACTTCGGTGATAGGGAGAAGGAAAGAGATGGAGGACGCCGTCGCCGTTATTCCGGGATTCATGTCTCGCACGTGTGATCACATCGGCGGTTGTACGGCTCCCGGTTCTAGATCCTCCGGTGAGATCGCTCCGGTTCATTTCTTCGGCGTTTACGACGGCCACGGTGGCTCTCAGGTGGCTAAGTTTTGTGCGAAGCGGATGCACGATGTTATAGCAGAGGAGTGGGACCGAGAAATGGAAGGTGGCGCTCGATGGCACAGAAGATGGGAAACTGTATTTGCTAACAGTTTTGAGAGGACTGACAATGAAATCCTATCAGACGCAGTTGCGCCTGAAATGGTAGGATCTACTGCCTCTGTGGTGATTCTATCTGGTTGCCAAATTATTACATCCAACTGCGGCGACTCAAGGGTAGTTCTTTACCGCAGGACACAAACTATCCCCTTGACAGTGGATCAGAAGCCGGATAGACAAGATGAACTTTTGAGAATTGAAGGAGGAGGAGGAAGAGTCATAAACTGGAATGGAGCTAGGGTGTTTGGTGTTCTTGCCATGTCCAGGGCCATAGGTGATCGGTACTTGAGACCCTGGATTATTCCGGTGCCAGAGATAACTTTCACAGCAAGAACCGATGAGGATGAGTGCTTAGTTTTGGCTAGTGATGGACTCTGGGATGTAATGACCAATGAAGAGGTTGGAGAAGTAGCACGCCACATTCTTAGAAGGCGCCGCAGATCATTGTCAATGGAGGAAGCATCTCCTGCACAAGTTGTTGCCGACAGCTTGACTGAAATTGCATTAGGTAGAAATAGTAAAGATAACATTTCAATCATAGTTGTTGATCTGAAATCAAAGAGAAAACGTCAGCAAAGGCCTCCTTTAATTTCCTAA 1155 0.51 MDEDEQLERFDSEFASTSSISSTLSTDDFRNLTSSGDISSISSGSGEIPPVSVLAPPFLHCEGSNDGETAAAREKCVGRSNKGVSWGHTSVIGRRKEMEDAVAVIPGFMSRTCDHIGGCTAPGSRSSGEIAPVHFFGVYDGHGGSQVAKFCAKRMHDVIAEEWDREMEGGARWHRRWETVFANSFERTDNEILSDAVAPEMVGSTASVVILSGCQIITSNCGDSRVVLYRRTQTIPLTVDQKPDRQDELLRIEGGGGRVINWNGARVFGVLAMSRAIGDRYLRPWIIPVPEITFTARTDEDECLVLASDGLWDVMTNEEVGEVARHILRRRRRSLSMEEASPAQVVADSLTEIALGRNSKDNISIIVVDLKSKRKRQQRPPLIS 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g02208 384 CDD PP2Cc 87 370 IPR001932 -
Gma05g02208 384 Gene3D - 75 380 IPR036457 -
Gma05g02208 384 ProSitePatterns PPM-type phosphatase domain signature. 135 143 IPR000222 GO:0043169
Gma05g02208 384 ProSiteProfiles PPM-type phosphatase domain profile. 85 370 IPR001932 -
Gma05g02208 384 MobiDBLite consensus disorder prediction 1 26 - -
Gma05g02208 384 Pfam Protein phosphatase 2C 93 363 IPR001932 -
Gma05g02208 384 PANTHER ALPHABET, ISOFORM E-RELATED 67 379 - -
Gma05g02208 384 PANTHER PROTEIN PHOSPHATASE 2C 6-RELATED 67 379 - -
Gma05g02208 384 SMART PP2C_SIG_2 114 370 IPR001932 -
Gma05g02208 384 MobiDBLite consensus disorder prediction 12 26 - -
Gma05g02208 384 SUPERFAMILY PP2C-like 79 371 IPR036457 -
Gma05g02208 384 SMART PP2C_4 75 368 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g02208 Gma-Chr5 43178234 43187421 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g02208 86 380 PP2C-type Phosphatase Gene Family AT4G26080 50.476 1.70e-98 298
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g02208 K14497 - gmx:100782634 727.243
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g02208 05 43178234 43187421 Gma05g02208 05 43178234 43187421 ECH
Gma05g02208 05 43178234 43187421 Gma08g00323 08 2759096 2765405 GST