Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g02196 ATGTCGTGGCAAACTTACGTTGATGATCATTTGATGTGTGATATTGATGGCACAGGCCACCACCTCACTGCAGCTGCCATCATCGGCCATGATGGCTCTGTTTGGGCTCAAAGCTCTTCTTTTCCTCAGGCACaaatcactgatatcatgaaagatttcgatgaaccgggtcatcttgctcctacaggtttgcaccttgcaggaaccaaatatatggtcatccaaggagagtcaggagctgtcattcgtggaaagaagGGACCTGGAGGCATCACCATAAAGAAAACTGGTCAAGCTTTAGTTTTTGGTGTCTATGAGGAACCTGTGACTCCTGGACAATGCAACATGGTTGTTGAGAGGTTGGGAGATTACCTCATTGATCAAGGTCTCTAG 393 0.3232 MSWQTYVDDHLMCDIDGTGHHLTAAAIIGHDGSVWAQSSSFPQAQITDIMKDFDEPGHLAPTGLHLAGTKYMVIQGESGAVIRGKKGPGGITIKKTGQALVFGVYEEPVTPGQCNMVVERLGDYLIDQGL 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g02196 130 PANTHER PROFILIN 1 130 - -
Gma05g02196 130 ProSitePatterns Profilin signature. 1 8 IPR027310 GO:0003779
Gma05g02196 130 Gene3D Dynein light chain 2a, cytoplasmic 1 130 - -
Gma05g02196 130 PANTHER PROFILIN 1 130 IPR005455 GO:0003779
Gma05g02196 130 CDD PROF 2 129 IPR005455 GO:0003779
Gma05g02196 130 SMART prof_2 1 130 IPR005455 GO:0003779
Gma05g02196 130 PRINTS Profilin signature 3 12 IPR005455 GO:0003779
Gma05g02196 130 PRINTS Profilin signature 23 32 IPR005455 GO:0003779
Gma05g02196 130 PRINTS Profilin signature 39 59 IPR005455 GO:0003779
Gma05g02196 130 PRINTS Profilin signature 63 77 IPR005455 GO:0003779
Gma05g02196 130 PRINTS Profilin signature 99 112 IPR005455 GO:0003779
Gma05g02196 130 PRINTS Profilin signature 112 129 IPR005455 GO:0003779
Gma05g02196 130 SUPERFAMILY Profilin (actin-binding protein) 2 129 IPR036140 -
Gma05g02196 130 Pfam Profilin 1 129 IPR005455 GO:0003779
Gma05g02196 130 PRINTS Plant profilin signature 1 14 IPR005455 GO:0003779
Gma05g02196 130 PRINTS Plant profilin signature 29 42 IPR005455 GO:0003779
Gma05g02196 130 PRINTS Plant profilin signature 70 79 IPR005455 GO:0003779
Gma05g02196 130 PRINTS Plant profilin signature 83 98 IPR005455 GO:0003779
Gma05g02196 130 PRINTS Plant profilin signature 103 116 IPR005455 GO:0003779
Gma05g02196 130 PRINTS Plant profilin signature 116 129 IPR005455 GO:0003779
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g02196 Gma-Chr5 43075154 43077122 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g02196 1 130 Cytoskeleton Gene Families AT4G29340 82.090 1.12e-79 229
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g02196 K05759 - gmx:100784770 254.603
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g02196 05 43075154 43077122 Gma05g02196 05 43075154 43077122 ECH
Gma05g02196 05 43075154 43077122 Gma08g00310 08 2655504 2657607 GST