Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g02185 ATGGGAAGAGCTCCTTGTTGTGACAAAGCTAACGTGAAAAGAGGGCGTTGGTCTCCTGAAGAAGACGAAACTCTCAAAAACTATCTCAAGAAACATGCCACGCCTGGTAACTGGATAACTCTCCCACAAAAAGCAGGCCTTAAGCGCTGTGGAAAGAGTTGTCGTCTGAGATGGCTGAACTATCTCAGGCCTCATATCAAGCATGGAGGCTTCACACATGAGGAAGACCAATTTATCTGCTCCCTTTACGCCACCATCGGAACCAGGCAAGTTCCTTCTATATCCTTAACTAGCAAGCCAAAATTATAA 309 0.4563 MGRAPCCDKANVKRGRWSPEEDETLKNYLKKHATPGNWITLPQKAGLKRCGKSCRLRWLNYLRPHIKHGGFTHEEDQFICSLYATIGTRQVPSISLTSKPKL 102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g02185 102 SMART sant 13 64 IPR001005 -
Gma05g02185 102 PANTHER OS09G0431300 PROTEIN 1 89 - -
Gma05g02185 102 SUPERFAMILY Homeodomain-like 15 89 IPR009057 -
Gma05g02185 102 Pfam Myb-like DNA-binding domain 14 62 IPR001005 -
Gma05g02185 102 PANTHER OS09G0431300 PROTEIN 1 89 - -
Gma05g02185 102 CDD SANT 16 62 IPR001005 -
Gma05g02185 102 Gene3D - 6 68 - -
Gma05g02185 102 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 66 IPR017930 -
Gma05g02185 102 ProSiteProfiles Myb-like domain profile. 9 62 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g02185 Gma-Chr5 42966002 42966449 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g02185 1 89 MYB Transcription Factor Family AT3G49690 76.404 2.08e-48 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Gma05g02185 Myb_DNA-binding 3.7e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g02185 K09422 - dzi:111304188 172.17