Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g02184 ATGCTAGCTGTGGTTTTTGGGGTTAGGTGGTCCCTTATAGCTGCTCAGCTGCCTGGGAGAACAGACAATGATGTGAAAAACCATTGGAACACTAAGTTAAAGAAAATGTTTTTGGCAGCAAACACCAATGCCACTGGCAATACTGTTTTCTCAACTCCCACTTCTCAGCCTCAAGTTGAAGACTGCAGTGTCTTTGATGATCATGAGAACTCAGCTGAGTATCATGTCTTGGGTTTGGAGCAAACACCATTGCCTTTAGGATCAGATGTTTCAGGTCTTGGAAGCAGTTGTAGTGTACCACTATCCAATGAAGCAGTTTCAGCTTCCTTGGTAAAAGAGGAGAATGAGAATGGGACCCAATGGTTTGGTGAAGATGAATCATTTTTGCTTGATTTTGTGTATGAGGATAACGGGTTTGTTTCTCTAGAAAATAGCAGCGAAGTTGCCCCATCATTTGGCTCTCTCTATGCTCCAAACACAACAGAAAAGAGAAAGAGAGACAATTAA 507 0.4221 MLAVVFGVRWSLIAAQLPGRTDNDVKNHWNTKLKKMFLAANTNATGNTVFSTPTSQPQVEDCSVFDDHENSAEYHVLGLEQTPLPLGSDVSGLGSSCSVPLSNEAVSASLVKEENENGTQWFGEDESFLLDFVYEDNGFVSLENSSEVAPSFGSLYAPNTTEKRKRDN 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g02184 168 ProSiteProfiles Myb-like domain profile. 9 33 IPR001005 -
Gma05g02184 168 MobiDBLite consensus disorder prediction 146 168 - -
Gma05g02184 168 PANTHER TRANSCRIPTION FACTOR RAX3 3 95 - -
Gma05g02184 168 Gene3D - 2 58 - -
Gma05g02184 168 PANTHER OS09G0431300 PROTEIN 3 95 - -
Gma05g02184 168 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 37 IPR017930 -
Gma05g02184 168 CDD SANT 9 33 IPR001005 -
Gma05g02184 168 SUPERFAMILY Homeodomain-like 4 40 IPR009057 -
Gma05g02184 168 Pfam Myb-like DNA-binding domain 6 31 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g02184 Gma-Chr5 42965318 42965824 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g02184 2 38 MYB Transcription Factor Family AT5G65790 72.973 1.39e-13 65.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Gma05g02184 Myb_DNA-binding 1.8e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g02184 K09422 - gmx:100797458 343.199