Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g02177 ATGGGGAGGAGGATACTGAATGATGCGTTGAGGAGTATGGTGAATGCAGAGAGGAGAGGGAAAGCTTTGGTGGAACTCAAGCCAATCTCCACTGTTATGTCTTCCTTTCTCCAAATCATGAAACACCATGGGTATATCAAGGACTTTCAAGTCTATGATCCGCATAGAGTGGGGAGGATAAGAGTTGAACTACAAGGTAGGATTAACGATTGCAAGGCCCTTTCGCACCGAAAGGACCTTAAGGCAAGGGATATTGAAGCCTATAGATTGCAGACTCTTCCAACACATCAGTGGGGTTATGTTGTCATTACAACTCCTGATGGTATTTTGGATCATGAAGAGGCCATTAGGAAGAATGTAGGTGGCCAGGTTCTTGGTTACTTTCACTAA 390 0.4436 MGRRILNDALRSMVNAERRGKALVELKPISTVMSSFLQIMKHHGYIKDFQVYDPHRVGRIRVELQGRINDCKALSHRKDLKARDIEAYRLQTLPTHQWGYVVITTPDGILDHEEAIRKNVGGQVLGYFH 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g02177 129 ProSitePatterns Ribosomal protein S8 signature. 99 116 IPR000630 GO:0003735|GO:0005840|GO:0006412
Gma05g02177 129 Gene3D - 69 129 - -
Gma05g02177 129 SUPERFAMILY Ribosomal protein S8 3 129 IPR035987 GO:0003735|GO:0005840|GO:0006412
Gma05g02177 129 PANTHER 40S RIBOSOMAL PROTEIN S15A-5 1 129 - -
Gma05g02177 129 Pfam Ribosomal protein S8 6 127 IPR000630 GO:0003735|GO:0005840|GO:0006412
Gma05g02177 129 Gene3D - 2 68 - -
Gma05g02177 129 PANTHER 40S RIBOSOMAL PROTEIN S15A 1 129 IPR000630 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g02177 Gma-Chr5 42923897 42924827 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g02177 1 129 Cytoplasmic Ribosomal Protein Gene Family AT4G29430 79.845 2.85e-78 225
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g02177 05 42923897 42924827 Gma08g00291 08 2489976 2491286 GST