Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g02175 ATGGACAATATATCAAAGCCAGAAGTGTGCCCCAATCCAGTAATATTGCAGAGTGAGGGGGGCTTCATGGGTGCTGCACCTGATTCGGGGCAGCTAATGGCGTTTCTCTTGAAGCTTTTAAATGCTAAAAAGACAATTGAAGTGAGAGTTTTTACTGGATACTCTCTTCTCCTCACTGCACTCACCATTCCTAATGATGGAAAGATTATTGCTATGGATCTAGACAGAAAAGCTTATGAGATAGGACTACCATTCATTAAAAAGCCTGGTCTAGAACACAAGATTGACTTCATAGAGTCTCAAGCTTTACCAGTCCTTGATAAACTCCTAGAAGATGTGACGGAGTCATTATCTGCAGACGTCTTCGCTGAAATGATATGA 381 0.4147 MDNISKPEVCPNPVILQSEGGFMGAAPDSGQLMAFLLKLLNAKKTIEVRVFTGYSLLLTALTIPNDGKIIAMDLDRKAYEIGLPFIKKPGLEHKIDFIESQALPVLDKLLEDVTESLSADVFAEMI 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g02175 126 Gene3D Vaccinia Virus protein VP39 14 122 IPR029063 -
Gma05g02175 126 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 1 126 IPR002935 GO:0008171
Gma05g02175 126 PANTHER O-METHYLTRANSFERASE-RELATED 20 120 - -
Gma05g02175 126 Pfam O-methyltransferase 20 114 IPR002935 GO:0008171
Gma05g02175 126 PANTHER PROTEIN, PUTATIVE-RELATED 20 120 - -
Gma05g02175 126 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 17 112 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g02175 Gma-Chr5 42915325 42916458 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g02175 23 112 Monolignol Biosynthesis Gene Families AT4G26220 71.111 1.06e-41 136
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g02175 K00588 - gmx:100795229 170.244