Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g02169 ATGAGCAGCCAAAAGGGTCGTCATGAGCATGAAGAAGAGATGGGTACCTCAGAAAGCACCGGTAAAGTGGTTGTGGTTGCAGTGAAAGCTTCTAGAGATATTTCAAGGACTGCTTTGGTGTGGGCTTTGACTCATGTTGTTCAGCCAGGGGATTGCATTAAGCTGTTGGTTCTCATTCCGGCTCTTTCCTCAAACAAAAGGGTATGGGGACTTTCAAGATTTACTACTGATTGTGCCTCGAGTCATTGGAGATCCAGTTTAGGAACCATTTCAGATCAGAAAGAAGTTATTACAAATTCCTGTTCTCAATTAGTACTTCAACTCCATGATTTTTATGATCCAGAGAAGATAAAAATCAGAGTGAAGATTCTTTCTGGTTCTTTATGCGGAGCTGTTTCTGCTGAAGCCAAGAGAGTCCAGTCAAGCTGGGTTATATTGGACAAAAAATTGAAGCATGAAAAGAAATACTGCATGGAACAGCTGCATTGCAATATTGTAATTATGAAGCGGTCTAGGCCAAAGATTCTGCGCTTGAATTTGAACAGTTCGTCTAAGATGGAACTAAACATGGCTTGTCCATTGACACTTACAAAGAACTTCAAAGACAACTCTGAACATGCAGATATAATTAGAGGTCCAGCTGTTACTCCTGCTAGTAGTCCTGAGCAAGGGTCACCACTACTGACTGCAACTGATATTGGAACATCATCCATATCAAGCTCAGATCCTGCAACTTCACCATTTTTCCGCTCTGACAATAATGAAAGACAAAGGAGAGGTTTTACCTTTGTTCATGAGGGACTGACAAACCTGGAGGATATCGAGTCTGACTCTGAGAGCGAAAAGCTAAGTATGTCATCCAAGAGTTCATATTTTCAGCCATGGATTGCAAATGTAATTTGCATGGATGGTGATTTCTCAAGACATGAGAACAACATGCAAAGATCCAGTGACAAGACTTTAGCTACTGCCTATGAAGCTTTGCTTCAGAAATTCTCAAAGTTGGATCAAGATCCTATCCTAGGAATGCTTAACTGTAAACTTGATGTGAACTTAAGCAAAAGTGTTAGAGAAGCAATTTCACTGGCTAAAACTTCAGCCCCTGGACCTCCCCCTTTGTGCTCCATTTGTCAGCACAAGGCCCCTGTGTTTGGCAATCCACCAAGGTGGTTTACATTTTCTGAATTGCAACTTGCCACAGGTGGTTTTTCACAAGCAAACTTCTTGGCAGAAGGTGGTTTTGGTTCTGTACACCGCGGTGTCCTGCCTGATGGGCAAGTCATTGCTGTCAAGCAGTACAAATTAGCCAGTACTCAAGGAGATAAAGAGTTTTGCTCAGAAGTAGAGGTCTTAAGCTGTGCACAACATCGCAATGTTGTGATGTTAATTGGGTTCTGTGTGGATGATGGAAGAAGATTGCTAGTTTATGAATACATCTGCAATGGCTCTCTGGATTCTCATCTCTACAGACGAAAGCAGAATGTACTGGAATGGTCTGCTAGGCAAAAGATTGCAGTTGGAGCAGCTCGTGGCTTGAGATACCTTCATGAAGAATGTAGAGTGGGTTGTATTGTGCACCGTGACATGCGGCCAAACAATATTCTTCTCACTCATGATTTCGAGGCTTTAGTAGGAGATTTTGGACTAGCAAGGTGGCAGCCAGATGGAGACATGGGTGTGGAAACCAGGGTGATAGGAACATTTGGGTATTTGGCGCCAGAATATGCTCAAAGTGGTCAAATTACTGAAAAAGCTGACGTGTACTCGTTTGGGATAGTATTACTGGAGCTTGTCACAGGACGGAAAGCAGTAGATATAAATCGGCCCAAGGGCCAGCAATGCCTAAGTGAATGGGCACGCCCATTGCTTGAAAAACAAGCCATTTACAAACTAGTAGATCCGAGCTTAAGGAACTGCTATGTTGATCAAGAGGTTTATCGCATGCTGCAATGTTCCTCTTTGTGCATCGGACGCGATCCTCATTTAAGGCCACGAATGTCTCAGGTGCTCAGGATGCTGGAAGATTCTTCATTTGTAAAAAGCTTCGAGTTTTTCCTCCTAGATTTTTATATCAATGCTGTAAATGTTGTCTTCGGTTTTGTGGAGAGGAGAGGTGTGTCAATCACTCAATGGAACAAGATTGCCTCAACTCAACTAACCAAGGCACCGATCTTCACATAG 2181 0.4287 MSSQKGRHEHEEEMGTSESTGKVVVVAVKASRDISRTALVWALTHVVQPGDCIKLLVLIPALSSNKRVWGLSRFTTDCASSHWRSSLGTISDQKEVITNSCSQLVLQLHDFYDPEKIKIRVKILSGSLCGAVSAEAKRVQSSWVILDKKLKHEKKYCMEQLHCNIVIMKRSRPKILRLNLNSSSKMELNMACPLTLTKNFKDNSEHADIIRGPAVTPASSPEQGSPLLTATDIGTSSISSSDPATSPFFRSDNNERQRRGFTFVHEGLTNLEDIESDSESEKLSMSSKSSYFQPWIANVICMDGDFSRHENNMQRSSDKTLATAYEALLQKFSKLDQDPILGMLNCKLDVNLSKSVREAISLAKTSAPGPPPLCSICQHKAPVFGNPPRWFTFSELQLATGGFSQANFLAEGGFGSVHRGVLPDGQVIAVKQYKLASTQGDKEFCSEVEVLSCAQHRNVVMLIGFCVDDGRRLLVYEYICNGSLDSHLYRRKQNVLEWSARQKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILLTHDFEALVGDFGLARWQPDGDMGVETRVIGTFGYLAPEYAQSGQITEKADVYSFGIVLLELVTGRKAVDINRPKGQQCLSEWARPLLEKQAIYKLVDPSLRNCYVDQEVYRMLQCSSLCIGRDPHLRPRMSQVLRMLEDSSFVKSFEFFLLDFYINAVNVVFGFVERRGVSITQWNKIASTQLTKAPIFT 726
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g02169 726 PANTHER OS01G0253100 PROTEIN 19 676 IPR045271 GO:0004714|GO:0006468
Gma05g02169 726 ProSitePatterns Tyrosine protein kinases specific active-site signature. 524 536 IPR008266 GO:0004672|GO:0006468
Gma05g02169 726 SUPERFAMILY Protein kinase-like (PK-like) 383 674 IPR011009 -
Gma05g02169 726 Gene3D Phosphorylase Kinase; domain 1 375 478 - -
Gma05g02169 726 MobiDBLite consensus disorder prediction 218 251 - -
Gma05g02169 726 ProSiteProfiles Protein kinase domain profile. 403 679 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma05g02169 726 MobiDBLite consensus disorder prediction 213 252 - -
Gma05g02169 726 CDD STKc_IRAK 409 674 - -
Gma05g02169 726 Pfam Protein tyrosine and serine/threonine kinase 407 673 IPR001245 GO:0004672|GO:0006468
Gma05g02169 726 Gene3D Transferase(Phosphotransferase) domain 1 479 685 - -
Gma05g02169 726 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASE-LIKE DOMAIN KINASE 19 676 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g02169 Gma-Chr5 42851976 42855825 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g02169 378 686 Trihelix Transcription Factor Family AT1G68690 50.479 1.55e-99 319
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Gma05g02169 PK_Tyr_Ser-Thr 1.2e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g02169 - - gmx:100305413 1337.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g02169 05 42851976 42855825 Gma05g02169 05 42851976 42855825 ECH
Gma05g02169 05 42851976 42855825 Gma08g00281 08 2420139 2423962 GST