Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g02162 ATGGCGGGTGCGATGGGTATGAAGGTCGACAAGATTCGCCAAATCGTGCGTCTCAAGCAGCTGATGACTCGCTGGAAGCACATCAGCCTCCGCCGCCGCTCCTCCGACGAGCCCTCCGCCGTGCGACGCCCTCCCTCCGGCTTCATCTTCGTGTACGTGGGCCCCGAACGCACTCGCTTCGCCATCCCCGCGCGCTTCCTCAACCTTGCTCTCTTCGAGGGCCTCCTCAAACAAACCGAAGAAGAGTTCGGACTCCGAGGTAACGGCGGTTTGGTCCTCCCTTGCCAAGTCCCGTTCTTCTCTAACGTCGTCAAGTACCTCCACAAGGACGAACACAAGTACGGAAGTCTCTCTCTTCAAGACTTCGTTAACATGCTTTCCGCCTCCTCCTCCGATTCCTGTAAGGAAAACGTCGCCGTTTTTGCTCCTCTGCTCCAGAAAGCAGAGGTTTGA 453 0.5762 MAGAMGMKVDKIRQIVRLKQLMTRWKHISLRRRSSDEPSAVRRPPSGFIFVYVGPERTRFAIPARFLNLALFEGLLKQTEEEFGLRGNGGLVLPCQVPFFSNVVKYLHKDEHKYGSLSLQDFVNMLSASSSDSCKENVAVFAPLLQKAEV 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g02162 150 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 9 138 IPR003676 GO:0009733
Gma05g02162 150 Pfam Auxin responsive protein 17 107 IPR003676 GO:0009733
Gma05g02162 150 PANTHER - 9 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g02162 Gma-Chr5 42778011 42778760 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g02162 1 123 Calmodulin-binding Proteins AT3G43120 30.380 7.48e-21 81.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g02162 K14488 - gmx:100797463 300.056
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g02162 05 42778011 42778760 Gma08g00271 08 2334639 2335406 GST