Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g02141 ATGGCATCACACTGTGTAATGGCCGTGACGCCCTCAACCCCTCTTCTCTCCTTCCTCGAACGCCTCCAAGAAACAGCCTTCGAAACCTTCGCCCATTCCAACTTCGATCCCAAAACCTACGTGGACATGCCTCTCAAGTCCGCCCTCACGGTTACCGAGGACGCGTTCCAGAAGCTTCCGAGGAACGCCAACGGGTCCGTGCCGGTTGAGGATTTGAAGCGTTTCATAGAGGCCTACTTTGAAGGTGCAGGGGATGATCTGGTGTACCGGGACCCACAGGATTTCGTTCCCGAGCCGGAGGGTTTCTTGCCCAAGGTGAACCACCCTCAGGTTAGGGCCTGGGCCTTGCAGGTCCATTCACTTTGGAAAAACTTGAGCCGGAAAATATCCGGTGCGGTGAAGGCACAGCCAGACTTACATACGCTGCTCCCTCTCCCTGGTTCGGTTGTCATTCCCGGGTCGCGTTTTCGCGAGGTTTATTACTGGGATTCCTATTGGGTTATTAGGGGCCTGCTGGCCAGTCAAATGCATGACACAGCTAAGGCTATTGTCACCAATCTCATTTCCTTGATAGATAAATATGGCTTTGTTCTTAATGGGGCTAGAGCTTACTACACTAACAGGAGCCAGCCTCCCCTTTTAAGCGCCATGATTTATGAGATATACAATAGCACGGGTGACGTGGAATTAGTTAAAAGATCTCTACCTGCCTTACTGAAAGAATATGAATTTTGGAATTCAGATATACATAAACTGACCATTTTGGATGCTCAAGGTTGCACTCATACCTTAAATCGTTATTATGCAAAGTGGGACAAACCCAGGCCGGAATCGTCCATAATGGACAAGGCATCTGCTTCCAACTTCTCCAGTGTTTCAGAAAAACAGCAGTTTTACCGTGAACTGGCATCAGCTGCTGAATCAGGATGGGATTTCAGCACCAGATGGATGAGAAATCCACCTAATTTCACAACATTGGCTACAACATCTGTAATACCTGTTGATTTGAACGCATTTCTACTCGGGATGGAACTTAATATTGCCTTATTTGCAAAAGTTACTGGAGATAATAGCACTGCTGAACGGTTCCTGGAAAATTCTGATCTTAGAAAGAAGGCAATGGACTCTATTTTCTGGAATGCAAACAAGAAACAGTGGCTTGATTACTGGCTCAGCAGTACATGTGAGGAGGTTCATGTTTGGAAAAACGAGCATCAGAATCAAAATGTATTTGCTTCCAATTTTGTTCCTTTGTGGATGAAGCCATTTTACTCAGATACTTCGCTTGTGAGTAGTGTTGTTGAAAGTCTCAAAACATCTGGCCTGCTCCGTGATGCTGGAGTTGCAACTTCTTTGACTGATTCAGGGCAACAGTGGGACTTTCCAAATGGGTGGGCGCCGCTTCAACACATGCTAGTGGAAGGACTGCTAAAATCAGGATTGAAAGAAGCAAGGTTATTGGCTGAGGAAATTGCCATCAGATGGGTCACAACCAATTATATTGTTTATAAGAAAACAGGTGTAATGCATGAAAAGTTTGACGTGGAGCATTGTGGAGAATTTGGAGGTGGGGGCGAATATGTACCCCAGACTGGTTTTGGCTGGTCAAATGGAGTTGTGTTGGCATTCTTGGAGGAGTTTGGATGGCCTGAAGATCGGAACATAGAATGCTGA 1674 0.4624 MASHCVMAVTPSTPLLSFLERLQETAFETFAHSNFDPKTYVDMPLKSALTVTEDAFQKLPRNANGSVPVEDLKRFIEAYFEGAGDDLVYRDPQDFVPEPEGFLPKVNHPQVRAWALQVHSLWKNLSRKISGAVKAQPDLHTLLPLPGSVVIPGSRFREVYYWDSYWVIRGLLASQMHDTAKAIVTNLISLIDKYGFVLNGARAYYTNRSQPPLLSAMIYEIYNSTGDVELVKRSLPALLKEYEFWNSDIHKLTILDAQGCTHTLNRYYAKWDKPRPESSIMDKASASNFSSVSEKQQFYRELASAAESGWDFSTRWMRNPPNFTTLATTSVIPVDLNAFLLGMELNIALFAKVTGDNSTAERFLENSDLRKKAMDSIFWNANKKQWLDYWLSSTCEEVHVWKNEHQNQNVFASNFVPLWMKPFYSDTSLVSSVVESLKTSGLLRDAGVATSLTDSGQQWDFPNGWAPLQHMLVEGLLKSGLKEARLLAEEIAIRWVTTNYIVYKKTGVMHEKFDVEHCGEFGGGGEYVPQTGFGWSNGVVLAFLEEFGWPEDRNIEC 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g02141 557 PRINTS Glycosyl hydrolase family 37 signature 194 212 IPR001661 GO:0004555|GO:0005991
Gma05g02141 557 PRINTS Glycosyl hydrolase family 37 signature 264 281 IPR001661 GO:0004555|GO:0005991
Gma05g02141 557 PRINTS Glycosyl hydrolase family 37 signature 299 316 IPR001661 GO:0004555|GO:0005991
Gma05g02141 557 PRINTS Glycosyl hydrolase family 37 signature 331 348 IPR001661 GO:0004555|GO:0005991
Gma05g02141 557 PRINTS Glycosyl hydrolase family 37 signature 374 390 IPR001661 GO:0004555|GO:0005991
Gma05g02141 557 PRINTS Glycosyl hydrolase family 37 signature 451 467 IPR001661 GO:0004555|GO:0005991
Gma05g02141 557 PRINTS Glycosyl hydrolase family 37 signature 531 544 IPR001661 GO:0004555|GO:0005991
Gma05g02141 557 Pfam Trehalase 34 548 IPR001661 GO:0004555|GO:0005991
Gma05g02141 557 Gene3D - 22 555 IPR012341 GO:0005975
Gma05g02141 557 PANTHER TREHALASE 4 557 - -
Gma05g02141 557 PANTHER TREHALASE 4 557 IPR001661 GO:0004555|GO:0005991
Gma05g02141 557 SUPERFAMILY Six-hairpin glycosidases 31 550 IPR008928 GO:0005975
Gma05g02141 557 ProSitePatterns Trehalase signature 2. 458 467 IPR018232 GO:0004555|GO:0005991
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g02141 Gma-Chr5 42557691 42562748 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g02141 9 557 Trehalose Biosynthesis Gene Families AT4G24040 59.855 0.0 688
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g02141 K01194 - gmx:547539 1140.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g02141 05 42557691 42562748 Gma05g02141 05 42557691 42562748 ECH