Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g02129 ATGGGTGTTCCACAACCTCCACCTCCCTCTCAACATCTCTATCCACAAGAAATTCAGCTTAAACTTTACCAAGCCTTCATATTCTCAATTCCCATACTCTTTTCCATCATTTTGGTTCTTTTGTTTTACTTGTTCTACCTCAAAAGGAGGGCTTCTTCTCTCTCATCACCACCTCTCCACATACTTCCCAGTACTACTAATTCACAAACTACATATCCTTATCCTTCACAACCTTGCCGTTTAGATCTGACAGTGCAATTTCTGGACAAACTTCCAAGAATTTTGTTTCATGAGGATTTAAGAACAGGAGATTCAGTATGTTGTGTTTGCCTAGGAGAATTTGAGCTGAAGGAAGAGTTGCTACAGATTCCTTATTGCAAGCATGTGTTTCATATAAGCTGCATAAGTAACTGGCTGCAATCAAACTCCACGTGTCCACTTTGTAGATGCTCCATCATTCCCTCTACCAAGTTCCTTAATCCCGCGCCACCTATTATATCAGACCCAACACGGCAAGGTGGAGTTTCAGGCTCTTCATCACACATCTTGTCATTGCCTCATCAACAAGAAGAAGTTGGTGCTTCCACAAATACTACCATTTTTCAAGGGAATGATGTATAA 621 0.409 MGVPQPPPPSQHLYPQEIQLKLYQAFIFSIPILFSIILVLLFYLFYLKRRASSLSSPPLHILPSTTNSQTTYPYPSQPCRLDLTVQFLDKLPRILFHEDLRTGDSVCCVCLGEFELKEELLQIPYCKHVFHISCISNWLQSNSTCPLCRCSIIPSTKFLNPAPPIISDPTRQGGVSGSSSHILSLPHQQEEVGASTNTTIFQGNDV 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g02129 206 ProSiteProfiles Zinc finger RING-type profile. 107 149 IPR001841 -
Gma05g02129 206 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 77 154 IPR013083 -
Gma05g02129 206 PANTHER RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING 19 165 - -
Gma05g02129 206 SMART ring_2 107 148 IPR001841 -
Gma05g02129 206 PANTHER RING-H2 FINGER PROTEIN ATL7-LIKE 19 165 - -
Gma05g02129 206 SUPERFAMILY RING/U-box 85 158 - -
Gma05g02129 206 Pfam Ring finger domain 107 149 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g02129 Gma-Chr5 42474790 42476477 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g02129 3 179 C3H Transcription Factor Family AT4G10150 35.676 6.35e-33 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g02129 K19039 - gmx:100806499 379.407
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g02129 05 42474790 42476477 Gma05g02129 05 42474790 42476477 ECH
Gma05g02129 05 42474790 42476477 Gma08g00236 08 2000754 2002303 GST