Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g02103 ATGGAGAGTGACTTGAGCTGGGAGCAGAACACGCTCATAAATGAGCTAATTCAGGGGATGGAGGTAGCAAGGAAGTTGAAGGCAGACTTGAGGATGCCGTATTCAGTTGACTCAAGAGATTTGCTTGTGCAGAGGATATTATCTTCTTATGAAAAGGCTCTACTGATTCTAAGATGCAATGCATCATCAACTTCCGAGTTGCAGGCCATGAGTCAAGCAACACCAACTTTGCTACCCGAGTCCCCATTATCTGTCCATGGAAGTCCTCTGCGCGAGGACGTTGATGGGACCATCAAGGATCACCAAGAAGTTAAACATGATTCAAAGAAAAGAAAGGCAACGCCCAAATGGATGGATCATGTAAGAGTGAGCTGTGAAAGTGGTCTTGAAGGACCACATGAAGATAGCTACAACTGGAGAAAATATGGTCAGAAAGACATCCTTGGAGCCAAATATCCCAGAAGTTACTATAGGTGCACCTTCCGCAACACTCAGGGCTGTTGGGCAACAAAGCAAGTGCAGAGATCAGATGAAGATCCCACAGTATTTGACATAACTTACAGAGGCAAGCATACCTGTTCTCAGGGAAACAATGCCGTTCTGCCACCTAAGTCACCAGAAAAACAAGAAAAACCAACACACAGTCATAACATTGATATTCACCGTGCACAGGCATCTCAAGAAAGCCTTACAAAGTTCAGAAACATCTTGTCTGTCAACACAGATAATCTGAACAATGGAGATATGGCATATCCTTTCACTTTCCCTTCAACTTCATTTGGATGCATGAAACAAGACAACCACAGCTTGATTCCTTGGGCCCTGGAGAACGAGTCCTTCTTAAGCGACCTATACCAAACACACCTTTTATCCACAACAATACCAGAATCAAACTATTTCCCATCTCCAACTTTCCAGATGAATGTGTTTGATGGGATCTACAGCAAGCCACATTCGGAATCCGATATCAATGAGATCATTTCCACCAACACATCAGCAACCAATTCTCCAATTCCTGATTTCAATTTCTCACTTGATCCAGTGGAAATTGACCCAAATTTCCCTTTCAATACCCCAGGACTTTTCTCCTGA 1092 0.4341 MESDLSWEQNTLINELIQGMEVARKLKADLRMPYSVDSRDLLVQRILSSYEKALLILRCNASSTSELQAMSQATPTLLPESPLSVHGSPLREDVDGTIKDHQEVKHDSKKRKATPKWMDHVRVSCESGLEGPHEDSYNWRKYGQKDILGAKYPRSYYRCTFRNTQGCWATKQVQRSDEDPTVFDITYRGKHTCSQGNNAVLPPKSPEKQEKPTHSHNIDIHRAQASQESLTKFRNILSVNTDNLNNGDMAYPFTFPSTSFGCMKQDNHSLIPWALENESFLSDLYQTHLLSTTIPESNYFPSPTFQMNVFDGIYSKPHSESDINEIISTNTSATNSPIPDFNFSLDPVEIDPNFPFNTPGLFS 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g02103 363 ProSiteProfiles WRKY domain profile. 128 191 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma05g02103 363 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 1 359 IPR044810 GO:0003700
Gma05g02103 363 PANTHER WRKY TRANSCRIPTION FACTOR 41-RELATED 1 359 - -
Gma05g02103 363 Pfam WRKY DNA -binding domain 134 193 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma05g02103 363 SUPERFAMILY WRKY DNA-binding domain 132 195 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma05g02103 363 MobiDBLite consensus disorder prediction 194 215 - -
Gma05g02103 363 Gene3D WRKY domain 119 196 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma05g02103 363 SMART WRKY_cls 133 195 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g02103 Gma-Chr5 42274814 42276126 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g02103 5 258 WRKY Transcription Factor Family AT4G23810 46.739 1.14e-69 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gma05g02103 WRKY 7.3e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g02103 - - gmx:100815760 751.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g02103 05 42274814 42276126 Gma05g02103 05 42274814 42276126 ECH
Gma05g02103 05 42274814 42276126 Gma16g00238 16 2573087 2576271 ECH
Gma05g02103 05 42274814 42276126 Gma07g00537 07 5178644 5181564 ECH
Gma05g02103 05 42274814 42276126 Gma03g02359 03 48760348 48763203 ECH
Gma05g02103 05 42274814 42276126 Gma19g02399 19 52546413 52549172 ECH
Gma05g02103 05 42274814 42276126 Gma08g00208 08 1800899 1802212 GST
Gma01g02250 01 57675046 57677042 Gma05g02103 05 42274814 42276126 PCT