Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g02089 ATGGAATTTCTACCCATTTTCTCTTTCATTTCCCTGTTGTTGTGTTTGGTTCTGTGGCAAGTAAGTGGTGAACCTGTTGAAGACAAGGAGGCTTTGCTTGACTTTGTGAGCAAGTTCCCTCCTTCAAGGCCTCTGAATTGGAATGAGAGTTCCCCCATGTGTGATTCTTGGACTGGAGTGACTTGCAATGTAGACAAGTCCAAAGTAATAGCAATTAGGTTGCCAGGGGTTGGATTTCATGGCACTATTCCGCCTGATACTATTAGCCGCCTCTCAGCACTGCAAACTTTGAGCCTCAGATCCAATGTCATAACTGGCCATTTCCCTTCTGATTTTTCCAATCTGAAGAACTTGTCTTTTCTCTATCTTCAGTTCAACAATATTTCTGGTCCTTTGCCTGATTTCTCAGCCTGGAAGAACCTCACTGTTGTCAATTTGTCCAATAACCATTTCAATGGCACCATCCCTTCCTCCCTTAACAACTTGACTCAGCTTGCTGGTTTGAACCTTGCAAACAACAGTCTTTCTGGAGAAATTCCCGACCTCAACCTGTCAAGATTGCAGGTGCTGAATTTGTCCAACAACAGCTTGCAGGGAAGTGTGCCTAATTCCCTGCTAAGGTTTCCTGAGTCTGCATTCATTGGGAATAACATTTCCTTTGGAAGTTTTCCCACGGTTTCTCCAGAGCCTCAACCGGCTCATGAGCCATCTTTCAAGTCCAGGAAGCGTGGAAGGCTCAGCGAAGCTGCGCTGCTGGGAGTTATTATTGCTGCTGGTGTTTTAGGCCTCGTGTGTTTTGTTTCTTTGGTGTTTGTGTGCTGCTCAAGAAGAGTTGACGAGGATGAGGAAACCTTCAGTGGGAAGTTGCACAAGGGAGAAATGTCTCCTGAGAAAGCAGTTTCAAGGAACCAGGATGCTAACAATAAACTGGTTTTCTTTGAGGGGTGTAATTATGCCTATGATTTGGAGGATTTGTTGAGGGCTTCTGCTGAGGTGCTGGGAAAGGGAACGTTTGGAACTGCCTATAAGGCAATACTTGAGGATGCAACCATGGTTGTTGTGAAGAGGTTGAAGGAGGTAGCCGCTGGAAAGAAGGATTTTGAGCAGCACATGGAGATTGTAGGAAGTCTTAAGCATGAGAATGTGGTTGAGCTCAAGGCATATTATTATTCCAAAGATGAGAAACTCATGGTATATGATTACCACAGTCAGGGGAGCATCTCTTCCATGTTGCATGGCAAAAGAGGAGAGGATAGGGTGCCTTTAGATTGGGATACTCGACTGAAAATAGCCTTAGGTGCTGCAAGAGGCATTGCTCGTATTCATGTTGAGAATGGTGGCAAGCTTGTACATGGCAACATCAAATCCTCAAACATCTTCCTCAACACCAAACAGTATGGCTGCGTGTCTGACCTTGGCCTGGCAACCATATCAAGCTCACTTGCCTTACCAATATCACGAGCAGCCGGTTACCGTGCACCAGAAGTTACAGACACCAGAAAGGCAGCACAGCCCTCAgatgtttacagctttggtgtggtgttgctagagCTTCTGACTGGGAAATCCCCTATCCACACAACTGCTGGCGATGAGATTATCCACCTTGTGAGGTGGGTTCATTCAGTTGTGCGCGAGGAGTGGACAGCTGAAGTGTTTGACTTAGAGCTGATGAGATATCCTAACATAGAAGAAGAGATGGTGGAAATGTTACAGATAGCCATGTCATGTGTGGTTAGGATGCCCGATCAGAGGCCTAAGATGTCTGAAGTAGTGAAGATGATAGAAAATGTGAGGCAGATTGATGCAGATACTCACTCATCATCTGGGAACCAAGTATCAACGTGA 1848 0.4481 MEFLPIFSFISLLLCLVLWQVSGEPVEDKEALLDFVSKFPPSRPLNWNESSPMCDSWTGVTCNVDKSKVIAIRLPGVGFHGTIPPDTISRLSALQTLSLRSNVITGHFPSDFSNLKNLSFLYLQFNNISGPLPDFSAWKNLTVVNLSNNHFNGTIPSSLNNLTQLAGLNLANNSLSGEIPDLNLSRLQVLNLSNNSLQGSVPNSLLRFPESAFIGNNISFGSFPTVSPEPQPAHEPSFKSRKRGRLSEAALLGVIIAAGVLGLVCFVSLVFVCCSRRVDEDEETFSGKLHKGEMSPEKAVSRNQDANNKLVFFEGCNYAYDLEDLLRASAEVLGKGTFGTAYKAILEDATMVVVKRLKEVAAGKKDFEQHMEIVGSLKHENVVELKAYYYSKDEKLMVYDYHSQGSISSMLHGKRGEDRVPLDWDTRLKIALGAARGIARIHVENGGKLVHGNIKSSNIFLNTKQYGCVSDLGLATISSSLALPISRAAGYRAPEVTDTRKAAQPSDVYSFGVVLLELLTGKSPIHTTAGDEIIHLVRWVHSVVREEWTAEVFDLELMRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMSEVVKMIENVRQIDADTHSSSGNQVST 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g02089 615 Gene3D Transferase(Phosphotransferase) domain 1 403 614 - -
Gma05g02089 615 PANTHER OS05G0588300 PROTEIN 22 605 - -
Gma05g02089 615 Pfam Leucine rich repeat 82 128 IPR001611 GO:0005515
Gma05g02089 615 ProSitePatterns Protein kinases ATP-binding region signature. 333 364 IPR017441 GO:0005524
Gma05g02089 615 Pfam Protein kinase domain 330 593 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma05g02089 615 ProSiteProfiles Protein kinase domain profile. 327 598 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma05g02089 615 Pfam Leucine rich repeat N-terminal domain 27 63 IPR013210 -
Gma05g02089 615 Gene3D Ribonuclease Inhibitor 27 136 IPR032675 -
Gma05g02089 615 PANTHER PROTEIN, PUTATIVE-RELATED 22 605 - -
Gma05g02089 615 SUPERFAMILY Protein kinase-like (PK-like) 331 595 IPR011009 -
Gma05g02089 615 SUPERFAMILY L domain-like 38 207 - -
Gma05g02089 615 Gene3D Phosphorylase Kinase; domain 1 293 401 - -
Gma05g02089 615 Gene3D Ribonuclease Inhibitor 137 225 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g02089 Gma-Chr5 42182772 42185553 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g02089 17 598 Receptor kinase-like Gene Family AT4G23740 67.568 0.0 791
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Gma05g02089 Pkinase 6e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g02089 - - gmx:100814524 1160.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g02089 05 42182772 42185553 Gma05g02089 05 42182772 42185553 ECH
Gma05g02089 05 42182772 42185553 Gma08g00197 08 1719688 1724017 GST
Gma01g02242 01 57593490 57596007 Gma05g02089 05 42182772 42185553 PCT
Gma11g00174 11 1355373 1357852 Gma05g02089 05 42182772 42185553 PCT