Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g02088 ATGAACGACGCAGATGTCTCAAAGCAAATCCAGCAGATGGTGCAGTTCATCCGCCAGGAAGCTGAGGAAAAGGCCAACGAGATCTCTGTCTCCGCCGAAGAGGAATTCAATATCGAGAAGCTGCAGTTGGTCGAAGCCGACAAGAAGAAGATCAGGCAAGAATACGAACGCAAAGAGCGCCAAGTTGAAATTCGCAAGAAGATTGAGTACTCGATGCAGCTAAATGCTTCTCGGATTAAAGTTCTTCAAGCTCAAGATGACGTGATCAGTTCCATGAAAGAAGCTGCATCCAAGGAACTGttgaatgtgagtcatcatcatcatttgaatctactgagtcatcatcatcatGAGTACAGAAACCTTCTGAAAGATCTCATTGTTCAGTGTTTGCTTAGACTGAAAGAACCTTCAGTCCTATTGAGATGTCGGAAAGATGACCTGCACTTGGTAGAGCATGTGCTGGATTCATCTGCACAGGAGTATGCTGAGAAAGCAAATGTTGATCCCCCAGAGATCATTGTTGACAACCAAGTTTATCTTCCACCTGGACCCAGTCATCACAATTCTCATGATCTCTACTGCTCCGGTGGGGTGGTGTTGGCTTCTCGTGATGGAAAGATTGTGTGTGAAAATACTCTTGATGCACGTCTTGATGTAGTTTTCCGTAAAAAGCTTCCAGAGATCCGAAAGCAGCTCTTTGGACAAATTGTTGCTTGA 720 0.4208 MNDADVSKQIQQMVQFIRQEAEEKANEISVSAEEEFNIEKLQLVEADKKKIRQEYERKERQVEIRKKIEYSMQLNASRIKVLQAQDDVISSMKEAASKELLNVSHHHHLNLLSHHHHEYRNLLKDLIVQCLLRLKEPSVLLRCRKDDLHLVEHVLDSSAQEYAEKANVDPPEIIVDNQVYLPPGPSHHNSHDLYCSGGVVLASRDGKIVCENTLDARLDVVFRKKLPEIRKQLFGQIVA 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g02088 239 Coils Coil 7 27 - -
Gma05g02088 239 Coils Coil 41 61 - -
Gma05g02088 239 PANTHER ATPASE H+-TRANSPORTING V1 SUBUNIT E1A-RELATED 1 239 IPR002842 GO:0033178|GO:0046961|GO:1902600
Gma05g02088 239 Gene3D - 1 62 - -
Gma05g02088 239 SUPERFAMILY V-type ATPase subunit E-like 87 235 - -
Gma05g02088 239 Pfam ATP synthase (E/31 kDa) subunit 16 234 IPR002842 GO:0033178|GO:0046961|GO:1902600
Gma05g02088 239 Hamap V-type proton ATPase subunit E [atpE]. 8 235 IPR002842 GO:0033178|GO:0046961|GO:1902600
Gma05g02088 239 Gene3D - 100 237 IPR038495 -
Gma05g02088 239 PANTHER ARCHAEAL/VACUOLAR-TYPE H+-ATPASE SUBUNIT E 1 239 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g02088 Gma-Chr5 42154760 42172095 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g02088 1 239 Primary Pumps ATPases(2) AT4G11150 71.967 2.14e-124 350
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g02088 K02150 - gmx:100500452 457.218
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g02088 05 42154760 42172095 Gma05g02088 05 42154760 42172095 ECH
Gma05g02088 05 42154760 42172095 Gma08g00195 08 1706108 1708848 GST