Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g02080 ATGGAACAGAAAAGCATTCTGATATCGGCTTTGGGTGTTGGGGTGGGAGTGGGAGTGGGGATTGGATTGGCCTCTGGACAAAGCGTTGGAAACTGGGGAGCCAACACTTTCTCCTCAAACGCTATTACTGCTGAGAAGATGGAGCAGGAAATGCTCAGACAAGTTGTTGATGGAAGAGAAAGCAACGTCACTTTTGACAAATTCCCTTATTACCTCAGGCATAACACAAATAACCTTTGCTCCTTAATTTCTAATCAAACACGGGTTTTGCTGACAAGTGCGGCTTATGTCCATTTAAAGCATGCTGAGGTTTCTAAATATACACGTAATCTTGCTCCTGCAAGCCGGACTATTCTGCTTTCAGGGCCTGCAGAACTTTACCAACAGATGCTTGCCAAGGCTTTAGCTCATTACTTTGAGGCCAAGTTGCTTCTGTTAGATTTAACTGACTTTTCATTGAAGATTCAGAGTAAATATGGTGGTTCTTCCAACATAGAATCTTCTTTCAAAAGATCCACTTCAGAGACTACTTTGGAGCGGCTATCTGATCTATTTGGGTCATTTTCAATCTTTTCACAAAGGGAGGAACCTAAAGGCAAAATGAACAGGCCTAGCAGTGGAGTGGACCTCCAATCAATGGGGGCTGAAGTATCTTTAAATCCTCCAACACTCCATAGGAATGCTTCTTCCTCTTCAAATATTAGTGGCCTTGCTTCGCAAACCAATCCCACCAATTCAGTTCCTTTGAAGCGCACAACCAGCTGGTCTTTTGACGAAAAGATTCTTATTGAGTCTCTTCATAAGGTTCTGGCTTTTGTGTCAAAAACCTATCCCATTGTGCTATATTTGCGGGATGTTGATAGGCTGTTATATAAATCACAAAGGATATATAACTTGTTCCAAAAAATGTTGAAGAAACTATCTGGACCGATTTTGATTCTTGGTTCTCGAGTTATAGATTCCGGTAATGACTATGAAGAGGTGGATGAGAAACTTAATTCGCTCTTCCCATACAACATAGAAATCAGGCCCCCAGAAGATGAATCACATCTTGTCAGCTGGAAGTCTCAATTGGAAGAGGATATGAAGATGATACAAGTTCAGGATAACAAGAACCATATCATGGAAGTGCTTGCAGCCACTGATCTTGATTGTGATGACCTGGATTCCATTTTTGTTGCAGACACAATGATTCTCAGTAACTATATAGAAGAGATTATTGTGTCAGCAATTTCGTATCATTTGATGAAAAACAAAGACACTGAATACCGAAATGGGAAGCTTGTTATTTCTTCCAATAGTTTGTCCCATGCATTGAATATATTCCACAAGGGGAAATCCAGTAGAAGAGATGCATCAAAATTAGAAGATCATGCTGTAAAATCTGAGCAGCAAAGAGAGGAAGGAACTGCTATGAAACCAGAAGTGAAGTCTGAAAATGCTGCTCCTGTAAAAAAGACTGAAGCAGAAATATCAACTTCAGTGGGAAAGGCAGGTGGTGAAAAATCAGTTCCTGCACCCAAAGCCCCTGAAGTTCCTCTTGATAATGAGTTTGAGAAGCAAATAAGGCCAGAGGTAATACCAGCAAATGAGATTGATGTCACATTCTCTGATATTGGTGCCTTAGATGACACCAAAGAATCCCTTCAAGAACTAGTAATGCTTCCTCTTCGAAGGCCAGACCTTTTCACTGGAGGCCTTCTAAAGCCTTGTAGAGGAATATTGCTGTTTGGACCTCCTGGCACTGGGAAGACTATGCTGGCAAAGGCCATTGCGAAGGAGGCTGGAGCAAGTTTCATCAATGTGTCCATGTCTACCATCACCTCTAAATGGTTTGGTGAAGACGAGAAGAATGTTCGTGCTTTATTCACACTTGCAGCCAAGGTCTCCCCAACTATAATATTCCTGGACGAGGTTGATAGCATGCTTGGGCAACGGACCAGAGTTGGGGAGCATGAAGCAATGAGGAAAATAAAGAATGAATTTATGACCCATTGGGATGGACTTTTGACAAAGCAAGGGGAGCGGATCCTTGTTCTCGCTGCAACCAATAGGCCATTTGACTTGGATGAAGCTATTATTAGGCGATTTGAAAGAAGAATTATGGTAGAACTACCATCTGTGGAGAACAGGGAAAAGATTTTGAGGACTCTTTTGGCAAAAGAAAAGGTGGACAACGAACTTGATTTTAAGGAACTTGCAACTATGACAGAAGGATATACTGGAAGTGATCTAAAGAACTTGTGCACAACTGCTGCTTATCGGCCTGTTAGAGAGCTAATTCAGCAAGAGAGGCTAAAGAGTCTAGATAAAAAGCAGAAAGCTGCCAAGGGACAGAATAAAGATGTCCAAGAAAGTCAAGGAGGACAATCCATATTAGGAAATACTCAAGATGCTATAGATGGAGAAGAGGAAGTTAAACAGGAAAGAGTTATTACCCTTGGGCCATTGAATATGCAGGATTTCAAAGAGGCCAAAAATCAGGTTGCTGCAAGCTTTGCAGCTGAAGGGGCTGGAATGAGTGAGATGAAACAGTGGAACGATTTGTACGGAGAAGGTGGTTCAAGGAAGCAGCAGCAGTTGTCTTACTTCCTGTGA 2598 0.4184 MEQKSILISALGVGVGVGVGIGLASGQSVGNWGANTFSSNAITAEKMEQEMLRQVVDGRESNVTFDKFPYYLRHNTNNLCSLISNQTRVLLTSAAYVHLKHAEVSKYTRNLAPASRTILLSGPAELYQQMLAKALAHYFEAKLLLLDLTDFSLKIQSKYGGSSNIESSFKRSTSETTLERLSDLFGSFSIFSQREEPKGKMNRPSSGVDLQSMGAEVSLNPPTLHRNASSSSNISGLASQTNPTNSVPLKRTTSWSFDEKILIESLHKVLAFVSKTYPIVLYLRDVDRLLYKSQRIYNLFQKMLKKLSGPILILGSRVIDSGNDYEEVDEKLNSLFPYNIEIRPPEDESHLVSWKSQLEEDMKMIQVQDNKNHIMEVLAATDLDCDDLDSIFVADTMILSNYIEEIIVSAISYHLMKNKDTEYRNGKLVISSNSLSHALNIFHKGKSSRRDASKLEDHAVKSEQQREEGTAMKPEVKSENAAPVKKTEAEISTSVGKAGGEKSVPAPKAPEVPLDNEFEKQIRPEVIPANEIDVTFSDIGALDDTKESLQELVMLPLRRPDLFTGGLLKPCRGILLFGPPGTGKTMLAKAIAKEAGASFINVSMSTITSKWFGEDEKNVRALFTLAAKVSPTIIFLDEVDSMLGQRTRVGEHEAMRKIKNEFMTHWDGLLTKQGERILVLAATNRPFDLDEAIIRRFERRIMVELPSVENREKILRTLLAKEKVDNELDFKELATMTEGYTGSDLKNLCTTAAYRPVRELIQQERLKSLDKKQKAAKGQNKDVQESQGGQSILGNTQDAIDGEEEVKQERVITLGPLNMQDFKEAKNQVAASFAAEGAGMSEMKQWNDLYGEGGSRKQQQLSYFL 865
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g02080 865 Gene3D - 81 362 IPR027417 -
Gma05g02080 865 ProSitePatterns AAA-protein family signature. 677 696 IPR003960 GO:0005524|GO:0016887
Gma05g02080 865 SMART AAA_5 570 707 IPR003593 -
Gma05g02080 865 MobiDBLite consensus disorder prediction 446 484 - -
Gma05g02080 865 MobiDBLite consensus disorder prediction 446 512 - -
Gma05g02080 865 Pfam AAA+ lid domain 728 765 IPR041569 -
Gma05g02080 865 MobiDBLite consensus disorder prediction 225 245 - -
Gma05g02080 865 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 1 865 - -
Gma05g02080 865 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 113 376 IPR027417 -
Gma05g02080 865 MobiDBLite consensus disorder prediction 771 800 - -
Gma05g02080 865 MobiDBLite consensus disorder prediction 780 797 - -
Gma05g02080 865 Pfam ATPase family associated with various cellular activities (AAA) 574 704 IPR003959 GO:0005524|GO:0016887
Gma05g02080 865 Gene3D - 533 705 IPR027417 -
Gma05g02080 865 PANTHER P-LOOP NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN 1 865 - -
Gma05g02080 865 Gene3D - 706 786 - -
Gma05g02080 865 CDD AAA 572 705 - -
Gma05g02080 865 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 533 768 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g02080 Gma-Chr5 42071981 42079891 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g02080 534 766 Calmodulin-binding Proteins AT3G56690 37.712 2.97e-42 165
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g02080 - - gmx:100815589 1609.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g02080 05 42071981 42079891 Gma05g02080 05 42071981 42079891 ECH
Gma05g02080 05 42071981 42079891 Gma08g00183 08 1605996 1613035 GST
Gma11g00184 11 1436773 1444769 Gma05g02080 05 42071981 42079891 PCT