Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g02071 ATGGATGAATTTGCGTGCTTGAGAGATTGGGATTTGGAAGCTATTGTGAGAGGAAACACCGGTGAAGCCACCCCCATGGATGACCCAAATCCTGATTTTTCTTATTTCTTCTCTGAACAAGATGAGCTGCTTGATAGCTTTCCCGAATTCTCAGAAACCACGAGAGTCCTTGATGATTTGGAAGACCTTTACAAACCTTTCTACCCAGTTTTTCACCCTCTTTCACCGCACACCATCGTTACAACTTCCCCACCTATCCCCATAGAGCCTGAACAAGTGATCAAAGCATCAGAAGAGAAAGTAGCTCTACAAGGATTGAAAGTCACCGCAGCACCTAAATGTAAAAAAAGCAAGAAGAGCCAGAACAAGAGTGTGGTGAAGCAGGTGACAACAGCAGAAGGTCTTGATGATGCATGGGCATGGCGAAAATATGGACAGAAACCAATAAAGGGTTCACCCTATCCTCGAAGCTATTATAGATGCAGCAGTTCCAAAGGGTGTTTGGCGAGGAAACAGGTTGAAAGGAGCCACTTAGATCCTGCGGTTTTTCTGGTAACCTACACTGCTGAACACAGCCATCCCCACCCAACTCGAAGAAACTCTCTTGCTGGGACCACTAGGAAGAACAATTCCCTTGTTCCTCCTCCAACAACCACTCGTCACCAAAAGAAGACTACTTGTTCCTCAAGCGTTCAACAAAGCATGGACTTGAAGAAAGAGGAAGATTTTCTTGACTGGTTGGAGGATGATAGTGCTCAATTTGGTGATGGTTGGATTCCAAGCTCGGATCTAGAGAAACTGATAGGACTTGAGTGCCAACATTTTGCATTAGATACCGGTTTCACGGATGATTTTCCACACCCTTAA 867 0.4498 MDEFACLRDWDLEAIVRGNTGEATPMDDPNPDFSYFFSEQDELLDSFPEFSETTRVLDDLEDLYKPFYPVFHPLSPHTIVTTSPPIPIEPEQVIKASEEKVALQGLKVTAAPKCKKSKKSQNKSVVKQVTTAEGLDDAWAWRKYGQKPIKGSPYPRSYYRCSSSKGCLARKQVERSHLDPAVFLVTYTAEHSHPHPTRRNSLAGTTRKNNSLVPPPTTTRHQKKTTCSSSVQQSMDLKKEEDFLDWLEDDSAQFGDGWIPSSDLEKLIGLECQHFALDTGFTDDFPHP 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g02071 288 Gene3D WRKY domain 106 197 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma05g02071 288 SUPERFAMILY WRKY DNA-binding domain 129 196 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma05g02071 288 Pfam WRKY DNA -binding domain 136 194 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma05g02071 288 PANTHER WRKY TRANSCRIPTION FACTOR 63-RELATED 9 241 - -
Gma05g02071 288 MobiDBLite consensus disorder prediction 198 234 - -
Gma05g02071 288 MobiDBLite consensus disorder prediction 192 234 - -
Gma05g02071 288 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 9 241 IPR044810 GO:0003700
Gma05g02071 288 SMART WRKY_cls 135 195 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma05g02071 288 ProSiteProfiles WRKY domain profile. 130 196 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g02071 Gma-Chr5 41968198 41969676 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g02071 1 235 WRKY Transcription Factor Family AT4G23550 45.935 6.73e-54 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gma05g02071 WRKY 2.6e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g02071 K13426 - gmx:102663255 572.392
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g02071 05 41968198 41969676 Gma05g02071 05 41968198 41969676 ECH
Gma05g02071 05 41968198 41969676 Gma10g02188 10 49465910 49467025 ECH
Gma05g02071 05 41968198 41969676 Gma18g02196 18 55762651 55764722 ECH
Gma05g02071 05 41968198 41969676 Gma16g00288 16 3041246 3043246 ECH
Gma05g02071 05 41968198 41969676 Gma08g00174 08 1506030 1507788 GST
Gma01g02223 01 57442275 57443111 Gma05g02071 05 41968198 41969676 PCT
Gma11g00193 11 1517954 1518722 Gma05g02071 05 41968198 41969676 PCT