Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g02065 ATGATCATCCCGGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAGAGGGAGTTTGCTTCGCGAAGAAGGACTTCAATTTGGCCAAGCACCCTGAGATCGACGTGCCGAATCTGCAGGTGATTAAGCTGATGCAGAGTTTCAAGTCTCGCGAGTACGTGAGAGAAACTTTTGCTTGGATGCACTATTACTGGTTCCTCACCAACGATGGCATCGAGTTTCTCAGAACTTACCTTAACCTTCCTTCCGAAATTGTCCCTGCTACTTTGAAGAAGCAAGCCAAGCCACCTGGCAGGCCCTTTGGAGGCCCATCCGGTGATCGCCCTAGAGGTCCACCACGCTTTGAAGGGGAGCGTAGGTTTGGTGGTGATCGTGATGGATACCGTGGAGGTCCCCGAGGAGGACCTGGTGGTGACTTTGGAGGAGACAAGGGAGGAGCTCCTGCTGACTACAGGCCCTCTTTTGGGGGTCCTGGCGGAAGGCCCGGCTTTGGTCGTGGATCTGGTGGTTTTGGAGCGCCAACCAGCTCAAATCTTCCCCAAGAGCTAAGTTTTTCTGCCGTGAACATAGATCAGATCCATGGTAGTGGTACTCAGCTTATAACTCTCTATGATCTCGTCCACCACTTGCACAAAGAATGGCTGAATCTGATATATTATGAAGCAAGTCAAACGCTGATCTTCCATGTCAGCTTTCCATTTGCGCTTACAATTCCTTGCTTCAAGTATTCAACTAGCAAAAGTTGCATTTGTGTATTCATATTTGACACACGTATTGCAAATTGA 789 0.4918 MIIPEKNRKEICKYLFQEGVCFAKKDFNLAKHPEIDVPNLQVIKLMQSFKSREYVRETFAWMHYYWFLTNDGIEFLRTYLNLPSEIVPATLKKQAKPPGRPFGGPSGDRPRGPPRFEGERRFGGDRDGYRGGPRGGPGGDFGGDKGGAPADYRPSFGGPGGRPGFGRGSGGFGAPTSSNLPQELSFSAVNIDQIHGSGTQLITLYDLVHHLHKEWLNLIYYEASQTLIFHVSFPFALTIPCFKYSTSKSCICVFIFDTRIAN 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g02065 262 Pfam Plectin/S10 domain 3 94 IPR005326 -
Gma05g02065 262 PANTHER 40S RIBOSOMAL PROTEIN S10-1-LIKE 1 180 - -
Gma05g02065 262 MobiDBLite consensus disorder prediction 91 177 - -
Gma05g02065 262 PANTHER 40S RIBOSOMAL PROTEIN S10 1 180 IPR037447 -
Gma05g02065 262 Gene3D - 1 104 IPR036388 -
Gma05g02065 262 MobiDBLite consensus disorder prediction 112 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g02065 Gma-Chr5 41892883 41896957 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g02065 1 181 Cytoplasmic Ribosomal Protein Gene Family AT5G52650 75.691 2.36e-74 223
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g02065 K02947 K09422 gmx:100499910 237.269
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g02065 05 41892883 41896957 Gma05g02065 05 41892883 41896957 ECH
Gma01g02221 01 57424406 57426797 Gma05g02065 05 41892883 41896957 PCT
Gma11g00198 11 1552808 1554719 Gma05g02065 05 41892883 41896957 PCT