Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g02055 ATGTCTTCTGATCTCTATGCTTTTGACACTACCTTATACACACATTCAAACTCAGACTCGGTTTCCTCTGATGGAGTTGGAGACCTTCCTTTTCTCTCGGAATCTTTTCCTTTCTTCGCCAATTCTCAAGAGAATTCCAATGCTCTTTATAATTCCCTCGACCCGTTTTCCCCTTCTTTTTTCTCTTTCTCACCTCCAAGTTCCCACTTGGAAAGCCTTAGCCTTTACCATGCTAACCACGTGCAGCCTCTGTCAAATGGCCAAAACTTGGCAAATGAATTTGGAAGCTTCTCAGCTTTTGATGGGTCTGAAGTGAAAACTGAGGAATGCCAAATGGGTGTTGATTATGTCTACGGTCAGCAACTGCTTCCTCACAGTCACAGTTATAGTGGTGCTGAGAATTTTTCCAAGTACATGCTGAGGAGCTTCAGCAGCAACTCCTACGAAGGGAAACCTTACAGTGACACTCGCGAGGATTCTACAAAATTTCAAAGCCATGAGATGAGTTCCCCTGAAGACACTGTCTTTGGTGGACAAATGAGAAGGGTTTGCAGCACAGGAGATTTGCAGCAGAACATGAAGGGAAATCACATGTCTCCAACGGAGGCGCCGTTGTTGGAGGAATCGAACTTCAAAGTAGGGCGTTACAGTGCCGAGGAAAGAAAAGAAAGAATTTCTAAATACAGAGCCAAGAGAACCCAGAGGAACTTCAACAAAACCATTAAGTATGCATGCCGAAAGACACTAGCAGATAATCGACCACGCATACGTGGTAGATTTGCCCGCAACGACGAGGCCAGCGAAACTCCCAAGGTTTCATGTTCCACCCGAGATGAAGATGATGTCGATTTCTGGATGGAAGAATTGCGATTGCATGAAGAGCAAGACGATGTAACAGTGGTAACAGAACAGTATTTAATTGAGAAATTATGGAGCTAG 939 0.4441 MSSDLYAFDTTLYTHSNSDSVSSDGVGDLPFLSESFPFFANSQENSNALYNSLDPFSPSFFSFSPPSSHLESLSLYHANHVQPLSNGQNLANEFGSFSAFDGSEVKTEECQMGVDYVYGQQLLPHSHSYSGAENFSKYMLRSFSSNSYEGKPYSDTREDSTKFQSHEMSSPEDTVFGGQMRRVCSTGDLQQNMKGNHMSPTEAPLLEESNFKVGRYSAEERKERISKYRAKRTQRNFNKTIKYACRKTLADNRPRIRGRFARNDEASETPKVSCSTRDEDDVDFWMEELRLHEEQDDVTVVTEQYLIEKLWS 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g02055 312 ProSiteProfiles CCT domain profile. 221 263 IPR010402 GO:0005515
Gma05g02055 312 Pfam CCT motif 221 263 IPR010402 GO:0005515
Gma05g02055 312 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 9 299 IPR045281 GO:0009909
Gma05g02055 312 MobiDBLite consensus disorder prediction 152 166 - -
Gma05g02055 312 MobiDBLite consensus disorder prediction 148 174 - -
Gma05g02055 312 PANTHER CCT MOTIF FAMILY PROTEIN 9 299 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g02055 Gma-Chr5 41799779 41801637 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g02055 217 272 C2C2-CO-like Transcription Factor Family AT5G24930 48.214 1.10e-10 60.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Gma05g02055 CCT 8.9e-18 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g02055 - - gmx:102665661 591.652
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g02055 05 41799779 41801637 Gma05g02055 05 41799779 41801637 ECH
Gma05g02055 05 41799779 41801637 Gma08g00158 08 1343321 1345327 GST
Gma01g02211 01 57336839 57338351 Gma05g02055 05 41799779 41801637 PCT
Gma11g00207 11 1636692 1638695 Gma05g02055 05 41799779 41801637 PCT