Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g02039 ATGGCGAGAAGATCTCCTCCTCGGGTTAGCCAAACGTACGAGACAGGCTGTACGTGGCGAATGTTAAGAATCTTCAATTTTCGTGAAGGTAATTCTGACAGAAGATTGGTTTCCAATAGGAGGCTGAATGCTCATGCTAATGGAAATGGAAATTCTAGAAGTAGATCAGATGTGCTTAGCACATTTGATGAGAAGTACCTTCAAATTGGTGTAAGTTCCAGAAGAAGAAGAGATTATAGTTGTAAAAGTATCAGCGGCATAGAGAATGAACAGGTAGCAGATTGGAGAGAAGAAGTAACAAAGATGATTGTTGACCCGAGATTTGTGAATAAAAATTATCAGGGAAAAGATGGGGCAGACTGTGAGCCTAATCAGTTCTTGGATGCTTTACAGATTTTATTTTCAAACAAGGAGCTTTTCATAAAACTTTTGCAAGATCCCAACTCTTTGTTAGTAAAACAGATTCATGACTTACAAAGTACTCAAGTGAAAGAACCATATCAGCAGGCAAGGCAAAAAATGATGACTAAATTAAAAAAGCCTCAAGATGGTAATGCTACACAATGTGTAAAACCTTTTAAGCCCTTTGATAGATCTGATTTGAGGTTAAGTGTTAAGCCTCAGTCCTCCAACAGAATAGTAGTTTTGAAGCCTGGCACTGTTAATGTGGAAACAAGCTTTGCTAGTCCTCCCCATTCGCCTGATAGCTTCAGATCTCATGCACAAAATATTATGCCTTCATATTTTCCCTTTAGTTGCATAAAGAGAAAATTGAAGCATGTCATGAGAGTAAGGAGACAAGAACAGCAGTGGAGGACAGATGATGAAATGTCAAGTAAATTTTCCTGCAGTTCCCAGGGCTTGGAAGATGGTCAAAAAGTAAAACAATTGGAAATTGCTGAGAGAAATTCACCAATTAATGCCCATCCTAATGCTGGAAAAAGGTTGAATTCATATCTTGATCTGAAGAAGAGGGACAATATTATCAAGTTGGAGGATTCTGAGTTATGTATGGGGCTGGAAACTGCTTCATTTGGTGAAAGTCGTAGTAAGAACTCATACAATACTTCAGTTGGCCATTCTGAGGAAAATATACATGTTGAAGGTAGGAAAGGCCCATCTCAGATGTTAAACTGTGGAAGTGAGGAATGTGAACAGTGCACAAACTCTCTAGGGAGATCAATTCCTCGTCCTGACTCTTTGTACTTGCCAAGCATGCATAGGTACTGCAAGCACAGTTCCATTACTGAAAGGATGAGACATTACAGCAACTATCAAATGGTCCACAGAACCAGGTTGGGGCTTCCAAAAGAAGGGGAAAATGGCTCCTATAACTTTTTGGAACCGAAAATCAAGGATTCACCATTGGCCATTGTTAACATGCATACTGATAAGTTGCAACTTTTTGGTGAAGATATTAGAATCAGAAATAGCGTTCCTGGCGACAGTCTATTTGCACATTATGATATTCCTAGAGAACCAGATGGCAGATACAGGGACAGCCCTACTAGGAACATAGACATGAATGATATAACCGGAGGAAGTAGATCGTTTCTGGATTTGCATCCAGAGATCCAGACTTTTCCTTTTTCACAAGATGTTATTTCATCCCGTCAGAGAACAGATGATTATGTAAACATGGGAAACAAAGTTGAACACACCAGTGCTGAATCTGTTGTTCAGCAATTTACTAAGGATGATGTTACCAACCCACAAATCACCACCTTTCAACAAGATGAGTCACCGATACAAGTAATGCAAGACAAATTTGAAGAGAGCCATTTTGAAGACCTTATAAGACTCTCTTTGGATCCAATGAACAATTTAACCTTCTCCAAGGACATCTTACACAATGTAAGAGAAATTCTGCATGCTCTCAGCTTAAAATGGGATGAACTTACTCTGAAGAGATCATGTGACCAATTGTTGGATCCATCCACCTTTGTTGAACTGAAGGAACTAACTAGCCAACTTTCTGGTGGTAGAATCTTGCATGACTGTGTCATCGAAATTTTCATGCAGGTATATCAGAACTGTGGATTCCCACCTCATGTTTCAACAAAAAATCCAAATGTCCAAGCATATGTTGTGAAGAAACTTCTGGTTAAAGAGATTACAGAACTAGTTAAGTTGCACTTTCACCCTCGTCCATCACCTTTAACGTTAGAACAACTTGCTGAAAAGGACTTGGCAAGACGTGGTTCGTGGCTAAATATCCAAGTTGTTACAGAAGATATTGCAATAGAGGTGGAGAAAGATGTTCTTGAAAAAATGGTATTGGAAATTGCATCTGAGATGGATGTCAGAAGTATGTCTACTTATTACTCGTGGGATGATAAAGCACTATGGAAAGATTATCAAGCTACCATTTTCTGA 2376 0.3906 MARRSPPRVSQTYETGCTWRMLRIFNFREGNSDRRLVSNRRLNAHANGNGNSRSRSDVLSTFDEKYLQIGVSSRRRRDYSCKSISGIENEQVADWREEVTKMIVDPRFVNKNYQGKDGADCEPNQFLDALQILFSNKELFIKLLQDPNSLLVKQIHDLQSTQVKEPYQQARQKMMTKLKKPQDGNATQCVKPFKPFDRSDLRLSVKPQSSNRIVVLKPGTVNVETSFASPPHSPDSFRSHAQNIMPSYFPFSCIKRKLKHVMRVRRQEQQWRTDDEMSSKFSCSSQGLEDGQKVKQLEIAERNSPINAHPNAGKRLNSYLDLKKRDNIIKLEDSELCMGLETASFGESRSKNSYNTSVGHSEENIHVEGRKGPSQMLNCGSEECEQCTNSLGRSIPRPDSLYLPSMHRYCKHSSITERMRHYSNYQMVHRTRLGLPKEGENGSYNFLEPKIKDSPLAIVNMHTDKLQLFGEDIRIRNSVPGDSLFAHYDIPREPDGRYRDSPTRNIDMNDITGGSRSFLDLHPEIQTFPFSQDVISSRQRTDDYVNMGNKVEHTSAESVVQQFTKDDVTNPQITTFQQDESPIQVMQDKFEESHFEDLIRLSLDPMNNLTFSKDILHNVREILHALSLKWDELTLKRSCDQLLDPSTFVELKELTSQLSGGRILHDCVIEIFMQVYQNCGFPPHVSTKNPNVQAYVVKKLLVKEITELVKLHFHPRPSPLTLEQLAEKDLARRGSWLNIQVVTEDIAIEVEKDVLEKMVLEIASEMDVRSMSTYYSWDDKALWKDYQATIF 791
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g02039 791 PANTHER ADHESIN-LIKE PROTEIN, PUTATIVE (DUF3741)-RELATED 4 96 - -
Gma05g02039 791 PANTHER ADHESIN-LIKE PROTEIN, PUTATIVE (DUF3741)-RELATED 96 766 - -
Gma05g02039 791 Pfam Protein of unknown function (DUF3741) 108 149 IPR022212 -
Gma05g02039 791 Pfam Domain of unknown function (DUF4378) 619 761 IPR025486 -
Gma05g02039 791 PANTHER DUF3741 FAMILY PROTEIN 4 96 - -
Gma05g02039 791 PANTHER DUF3741 FAMILY PROTEIN 96 766 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g02039 Gma-Chr5 41668178 41672950 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g02039 546 764 TRM (TON1 Recruiting Motif) Superfamily AT2G45900 27.477 1.31e-15 79.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g02039 - - gmx:121174910 1600.49
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g02039 05 41668178 41672950 Gma05g02039 05 41668178 41672950 ECH
Gma05g02039 05 41668178 41672950 Gma08g00144 08 1216518 1220452 GST