Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g02037 ATGGTGCCAGAGAACTTGAAGAAACAACTTGCTTTGGCTGTGAGAAGCATCCATTGGAGCTATGCAATCTTCTGGACTGATTCAactacccaacccggGGTGTTGAGCTGGGGGGAAGGGTATTACAATGGAGACATTAAGACTAGGAAAACAAGTCAAGGAGTAGAGCTCAATTCTGACCAAATAGGGTTGCAGAGGAGTGAACAGCTGCGAGAACTATTCAAATCCCTCAAAACTGTAGAAGTCAGCCCTCAAACTAAAAGGCCTTCAGCAGCACTGTCCCCAGAAGATCTCACAGATGCTGAGTGGTATTACTTGGTTTGCATGTCCTTCATATTCAACATTGGCCAAGGGTTACCAGGAAGAACTCTAGCGAAGGGTCAATCCATTTGGCTGAACAATGCCCATTCTGCTGATTGTAAAATTTTTAGCCGTTCTCTTCTGGCAAAGGTGGATTCTACGGTTGTGTGCTTTCCGTTTAGGGAAGGGGTTATTGAGCTAGGTACTACTGAACAGGTCTCAGAAGATTTGAGTGTCATTGAACGGATCAAAACTTCTTTCTTGAACAGTCTGCATGTCGATGTTCCCAATAAGTCAGTAGCTACATTGAAATCAAGGAAACAGGAAGATCTTTCTTATGTAGCATTTGATCATAATGACTATAATGTTGAATCGATTCCAGAAGTTGGGTATGAAATAGCCAACACAACCTCTCCTAATGGTAGTTCAAATGCAATCCAAGCCAATCAACCACTAGATGACACACTTATGGTTGAAAGTATAACCAATGGCACTTCTCAAGTCCAAAACTGGCAAGTTATTGATGATGAATTGAGTAACTGTGTCCATAACTCCATGAATTCCAGCGACTGTATATCACCAACTTTTGCCAGCCTTGAGAATATTGCTTCTGCCCCCAAGTGTAACAACCCTTCTGATCCTTGTGCCCGAGATTTTCAAAAGTGCAACAACCCAAAAATGACCTTAGTGGATCCTCGAAGTGATGAGTGGCATTATCAGAGAGTTATTTCCACCCTTATAAAAAACACTGACCAGTTACTTATGGGAATGCATTTGCAAAAATTTCCTCAGGCATCAAGCTTTGTTAGTTGGAGGAAAGGAGAGCCAATGGATTCCCAATGGCCAAGAGCAGGAACCTCACAAAAGTTATTGAAGAAAGTATTGTTTGAAGTTCCTCAAATGCACTTGGATGGGCTTCATGAGTCTCAAGAAGAGAATGACTATAAAGAGGGAATGAGAGTAGAAGCTGATGAAAACGGCATGAACCATGTTATGTCAGAAAGGAGGAGAAGAGCAAAACTAAATCAAAGGTTTTTAACCCTTAGGTCAATGGTCCCTTCAATCAGTAAGGATGACAAAGTTTCGATACTAGATGATGCAATTGAATACCTTAAAAAGCTTGAGAGAAGGATAAACGAGTTGGAAGCTCACAGGGGTGTAACAGATATAGAGACTGGGACTAGAAGATCACCACAAGATACGGTGGAGAGGACTCCTGATCATTATTTTAGCAAAAATAATAATAATAATGGTAAAAAACCAGGGATGAAAAAGAGGAAGGCTTGTGGTGTAGATGAGAAAGGAAGAGAGATTAATTTAGATGCTTTAAAAGGCAGTTATGCTAATGATGTTATTGTGAGTACCAGTGACAATGGAATTGTGATCGAAATGAAGTGCCCCTCGAGAGCAGGAAGGATGCTAGAAATTATGGAAGCAATTAACAGTTTCAATATAGATTTTAGTTCAGTTCAGTCAACAGAAGCTGATGGAAATCTTTATCTGACCATTAAATCTGTGCTCACAGGACCAAGGGTTGCAACAGCCAAAAGAATCAAACTAGCACTACAAAAAGTGGCTTCCAAGTGCTGA 1890 0.4042 MVPENLKKQLALAVRSIHWSYAIFWTDSTTQPGVLSWGEGYYNGDIKTRKTSQGVELNSDQIGLQRSEQLRELFKSLKTVEVSPQTKRPSAALSPEDLTDAEWYYLVCMSFIFNIGQGLPGRTLAKGQSIWLNNAHSADCKIFSRSLLAKVDSTVVCFPFREGVIELGTTEQVSEDLSVIERIKTSFLNSLHVDVPNKSVATLKSRKQEDLSYVAFDHNDYNVESIPEVGYEIANTTSPNGSSNAIQANQPLDDTLMVESITNGTSQVQNWQVIDDELSNCVHNSMNSSDCISPTFASLENIASAPKCNNPSDPCARDFQKCNNPKMTLVDPRSDEWHYQRVISTLIKNTDQLLMGMHLQKFPQASSFVSWRKGEPMDSQWPRAGTSQKLLKKVLFEVPQMHLDGLHESQEENDYKEGMRVEADENGMNHVMSERRRRAKLNQRFLTLRSMVPSISKDDKVSILDDAIEYLKKLERRINELEAHRGVTDIETGTRRSPQDTVERTPDHYFSKNNNNNGKKPGMKKRKACGVDEKGREINLDALKGSYANDVIVSTSDNGIVIEMKCPSRAGRMLEIMEAINSFNIDFSSVQSTEADGNLYLTIKSVLTGPRVATAKRIKLALQKVASKC 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g02037 629 PANTHER TRANSCRIPTION FACTOR EGL1 3 625 - -
Gma05g02037 629 MobiDBLite consensus disorder prediction 491 526 - -
Gma05g02037 629 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 425 474 IPR011598 GO:0046983
Gma05g02037 629 Gene3D - 419 487 IPR036638 GO:0046983
Gma05g02037 629 Coils Coil 464 491 - -
Gma05g02037 629 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 428 487 IPR036638 GO:0046983
Gma05g02037 629 SMART finulus 431 480 IPR011598 GO:0046983
Gma05g02037 629 Pfam Helix-loop-helix DNA-binding domain 429 475 IPR011598 GO:0046983
Gma05g02037 629 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 6 187 IPR025610 -
Gma05g02037 629 PANTHER TRANSCRIPTION FACTOR TT8 3 625 - -
Gma05g02037 629 MobiDBLite consensus disorder prediction 491 507 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g02037 Gma-Chr5 41651740 41655295 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g02037 2 629 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G41315 45.373 1.08e-171 501
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Gma05g02037 bHLH-MYC_N 3.8e-47 CL0161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g02037 - - gmx:100795524 1238.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g02037 05 41651740 41655295 Gma05g02037 05 41651740 41655295 ECH
Gma05g02037 05 41651740 41655295 Gma08g00142 08 1199857 1203256 GST