Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g02030 ATGAAAACTAGCAACGAAAGTCCTTTCACTTTCCCTGTCTTTCATTGTTTTGACTGTTTCGAATTCCTGCGCTTGCTTAGCAAAAAGGGTCCTTTGGGTAAATTTGATAGTTTCTTGGCTAACCGGAATTTGCCAATGATTTATAGGGTTGGGATGGGTTGTGGCTTTTCCAAGTACACAGCGTGCTGCACGGGTTCTGAGCAAGATGGTCTGGCTGCTGAGGCTCAGGTTGATGGTGGAAACGAAGACAATGTTGTTGAGGGTGTTGACTTGCCGTGGTTTCATGAATTCACAATTGATCAGCTTAGGAAGGCTACGTCCGGATTTGCCATTGAAAATATAGTTTCTGAACATGGAGAAAAGGCTCCAAATGTGGTTTATAAAGGGAGACTTGATAATCAGATGCGAATTGCTGTCAAACGGTTCAACAGAAATGCCTGGCCAGAAGCGCAGCCATTTTTGGAGGAGGCTCGGGCCGTTGGTCAGCTCAGGAACCAAAGATTGATAAATCTGCTTGGATGTTGTTGTGAAGGTGAAGAAAGGTTACTTGTTGCAGAATATATGCCCAATGATACTTTGACAAAGCATTTATTCCATTGGGAAACTCAGCCCATGAGATGGGCAATGCGAATGAGGGTTGCTCTGTGCCTTGCCCAAGCTCTAGAGTACTGTACCAGCAAAGGACGTGCACTATATCATGATCTGAATGCCTACAGAGTTCTTTATGATGATGACTACAATCCTAGACTTTCATGCTTCGGTCTGATGAAAAATAGTAGGGATGGGAGAAGTTACAGTACAAATTTGGCGTTTACTCCACCTGAATATCTGAGGACAGGCAGAGTTACTCCAGAGAGTGTAACATATAGCTTTGGGACCCTTTTGCTTGACCTCCTCAGTGGCAAGCATATTCCTCCAAGCCATGCCCTTGACCTAATTAGAGACAAGAACCTTCAGATGCTATCAGACTCTTGCTTAGAAGGAGAGCTTACAAATGATGACGGGACTGAATTAGTGCGTCTAGCCTCACGATGTTTGCAATCTGAACCACGAGAGCGTCCTAATCCAAAGTCACTGGTTGCTGCTCTAATACCTCTACAGAAGGATTCTGAGGTTCCTTCTCATGTGTTGATGGGTATCCCAGATGGTACAGCTGCTTTTCCCCTTTCACCTCTTGGAGAAGCTTGTCTACGAATGGATCTGACTGCCCTGCATGAGGTGATGGAGAAAATTGGGTATAAAGACGACGAGGGCGCAGCAACTGAGCTTTCATTCCAAATGTGGACGAACCAGATGCAGGAAACGTTGAACTCAAAGAAGAAAGGGGATGCTGCTTTTCGGCACAAGGATTTTAAAACTGCAATTGATAGCTATACGATGTTCATTGATGTTGGAACCATGGTTTCTCCAACGGTTTATGTACGTCGTAGTCTATGTTATCTTATGAGCAATATGCCCGACGAAGCACTTAATGATGCAATGCAAGCACAAGTAATATCCCCCGTTTGGTACATTGCGTTTTATTTACAAGCTGTTGCTCTTTTAGCCCTGGGCAAGGAGAATGATGCCCAAGTGGCACTTAAAGAGGGTTCTTCACTGGAAACTAAAAAGAACACAAATTAG 1623 0.4424 MKTSNESPFTFPVFHCFDCFEFLRLLSKKGPLGKFDSFLANRNLPMIYRVGMGCGFSKYTACCTGSEQDGLAAEAQVDGGNEDNVVEGVDLPWFHEFTIDQLRKATSGFAIENIVSEHGEKAPNVVYKGRLDNQMRIAVKRFNRNAWPEAQPFLEEARAVGQLRNQRLINLLGCCCEGEERLLVAEYMPNDTLTKHLFHWETQPMRWAMRMRVALCLAQALEYCTSKGRALYHDLNAYRVLYDDDYNPRLSCFGLMKNSRDGRSYSTNLAFTPPEYLRTGRVTPESVTYSFGTLLLDLLSGKHIPPSHALDLIRDKNLQMLSDSCLEGELTNDDGTELVRLASRCLQSEPRERPNPKSLVAALIPLQKDSEVPSHVLMGIPDGTAAFPLSPLGEACLRMDLTALHEVMEKIGYKDDEGAATELSFQMWTNQMQETLNSKKKGDAAFRHKDFKTAIDSYTMFIDVGTMVSPTVYVRRSLCYLMSNMPDEALNDAMQAQVISPVWYIAFYLQAVALLALGKENDAQVALKEGSSLETKKNTN 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g02030 540 Gene3D Transferase(Phosphotransferase) domain 1 189 380 - -
Gma05g02030 540 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 52 540 IPR045845 GO:0004672|GO:0009742
Gma05g02030 540 Gene3D Tetratricopeptide repeat domain 422 534 IPR011990 GO:0005515
Gma05g02030 540 PANTHER TPR DOMAIN KINASE 52 540 - -
Gma05g02030 540 SUPERFAMILY Protein kinase-like (PK-like) 91 372 IPR011009 -
Gma05g02030 540 SUPERFAMILY TPR-like 439 533 IPR011990 GO:0005515
Gma05g02030 540 Pfam Protein tyrosine and serine/threonine kinase 125 362 IPR001245 GO:0004672|GO:0006468
Gma05g02030 540 ProSiteProfiles Protein kinase domain profile. 112 378 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma05g02030 540 Gene3D Phosphorylase Kinase; domain 1 87 187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g02030 Gma-Chr5 41576264 41586541 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g02030 97 388 Glycoside Hydrolase AT3G07070 32.812 7.88e-39 145
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Gma05g02030 PK_Tyr_Ser-Thr 1.7e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g02030 K14500 - gmx:100797107 995.727
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g02030 05 41576264 41586541 Gma05g02030 05 41576264 41586541 ECH
Gma05g02030 05 41576264 41586541 Gma08g00134 08 1116648 1127843 GST