Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g02024 ATGGTTAACAAGACCTTCATGGCGGACCACAATGTTGCACTTCCTGTTGATTCTGAAGAGATACTTGCAGCAGCGGAAGGAATGGCTCAAACTGGAATTATAGTGTCTATAAATAGGGAAGTAGTTGGGGTTTTAGCAGTATCTGATCCATTGAAACCAGCTGCACAAGAAGTCATTTCCATTCTCAAGTCTATGAAAATTAGGAGCATCATGGTGACTGGGGACAACTGGGGTACTGCCAATTCTATAGCAAGGGAAGTTGGAATTGAAACTGTTATTGCTGAGGCCAAACCAGAGCAGAAGGCAGAGCAAGTGAAGGATTTGCAGGCTTCTGGGTACAGGGGCATGGTGGGGGATGGTATCAATGATTCACCAGCACTTGTGGCAGCAGATGTAGGAATGGCAATTGGTGCTGGTACAGACATTGCTATTGAGGCTGCTGATATTGTCCTGATGAAGAGCAACTTGGAGGATGTCATAACTGCCATTGATCTTTCCAGAAAAACGTTTTCCCGTATCCGTCTCAACTACGTATGGGCTTTGGGCTACAATCTACTTGGCATTCCAATTGCTGCTGGAGCTCTTTTTCCTTCTACACGATTTCGGTTGCCCCCATGGATTGCTGGGGCTGCCATGGCTGCATCTTCTGTCAGTGTTGTGTGCTGCTCACTACTGTTGAAATATTATAGGAGACCCAAGAAGCTGGACAACCTTGAGATCCGGGGCATAAGCATTGAGTGA 741 0.4629 MVNKTFMADHNVALPVDSEEILAAAEGMAQTGIIVSINREVVGVLAVSDPLKPAAQEVISILKSMKIRSIMVTGDNWGTANSIAREVGIETVIAEAKPEQKAEQVKDLQASGYRGMVGDGINDSPALVAADVGMAIGAGTDIAIEAADIVLMKSNLEDVITAIDLSRKTFSRIRLNYVWALGYNLLGIPIAAGALFPSTRFRLPPWIAGAAMAASSVSVVCCSLLLKYYRRPKKLDNLEIRGISIE 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g02024 246 Gene3D - 2 51 IPR023299 GO:0000166
Gma05g02024 246 PANTHER COPPER-TRANSPORTING ATPASE HMA5-RELATED 3 238 - -
Gma05g02024 246 SUPERFAMILY HAD-like 33 223 IPR036412 -
Gma05g02024 246 Gene3D - 52 167 IPR023214 -
Gma05g02024 246 PRINTS P-type cation-transporting ATPase superfamily signature 43 54 - -
Gma05g02024 246 PRINTS P-type cation-transporting ATPase superfamily signature 65 75 - -
Gma05g02024 246 PRINTS P-type cation-transporting ATPase superfamily signature 117 136 - -
Gma05g02024 246 PRINTS P-type cation-transporting ATPase superfamily signature 140 152 - -
Gma05g02024 246 PANTHER ATP7, ISOFORM B 3 238 - -
Gma05g02024 246 Pfam haloacid dehalogenase-like hydrolase 9 131 - -
Gma05g02024 246 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 20 199 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g02024 Gma-Chr5 41551480 41552683 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g02024 3 246 Primary Pumps ATPases AT1G63440 83.673 8.01e-141 417
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g02024 K17686 - gsj:114413368 449.129