Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g02020 ATGAAGTTATATACTTCATTTTTGTTTCTTGCTTTGGTTTCCATGCTCTCTTTTGTGGCTTCTGTCATGGTCCCTAAAAATGAAGTTTTGGCACTTAAAACTTTCAAGGAAGCTGTGTATGAAGATCCACATATGGTTTTGTCCAATTGGAATACTTTGGATTCAGATCTTTGTGACTGGAATGGTGTTTCTTGCACTGCAACTCGAGATCATGTGATCAAGCTTAACTTATCTGGGGCTTCATTAAGGGGATTTCTTGCTCCAGAATTTGGGAAAATCACCTACTTACAAGAACTGATCTTGCATGGCAACAGTCTCATTGGAGTAATACCTAAAGAATTGGGCATGTTGAAATCTCTCAAGGTGTTGGATTTGGGAATGAATCAGTTAACTGGACCAATTCCTCCAGAGATTGGAAATTTGACCCAAGTTATGAAAATAAACCTGCAGTCCAATGGGTTGACTGGTAGGCTACCTCCAGAACTAGGAAAATTGAAATACCTTCAAGAGCTTCGGCTGGATAGGAATAAGCTTCAAGGATCTCTTCCTGGTGGTGGAAGTTCAAATTTTTCTTCAAATATGCATGGGATGTATGCCTCGGGTGTGAATTTAactggcttctgtcgttcgtctcagttaaaagttgcagatttttcatgtaacttttttgttggtagcatacccaaatgcttggcatatcttccaagATCAAGCTTTCAAGGAAATTGTCTCCATATCAAAGACATAAAACAGCGGACTTCGGTGCAATGTGCTGGTGCTTCAGTAGTGAACCCAAAGTACCAACCTGCTACTAAACATGTGACCAAGCATCAAGAAGCATCAAAACCTGCTTGGCTTTTGGCTCTAGAAATAGTGACTGGAACCATGGTTGGTTCTCTCTTTATTATTGCTATTCTCACTGCGATTCAGAGGTGTAACAACAAATCATCTATCATTATTCCTTGGAAAAAATCTGCAAGCGGAAAAGATTATATGGCAGTACATATAGACTCCGAGATGTTGAAGGATGTGATGAGGTATAACAGGCAGGACCTTGAAGTGGCCTGTGAAGACTTCAGCAACATAATTGGGTCCTCACCAGATAGTGTGGTCTACAAGGGTACAATGAAAGGTGGGCCTGAGATTGCTGTGATTTCCCTCTGCATTAGGGAAGATAATTGGACAGGATACCTTGAGCTCTATTTTCAGAGAGAGGTGGCAGACTTGGCAAGGTTAAATCATGATAACACAGGAAAGCTGCTAGGATATTGTAGAGAGAGCAATCCATTTACAAGGATGCTGGTTTTTGAATATGCATCAAATGGGACACTTTATGAGCACCTACATTGTTATGAAGAAGGTTGCCAGTTGTCTTGGACAAGGCGTATGAAGATTATCATAGGCATTGCACGTGGACTTAAGTATTTGCACACTGAAATTGAGCCGCCATTCACTATCTCAGAATTGAATTCCAATGCCGTTTACCTCACAGAAGATTTTTCCCCTAAGCTGGTTGATTTTGAAAGTTGGAAGACAATTCTTGAAAGATCAGAAAGAAACTCTGGTAATGTTAGTAGCCAGGGTGCTGTTTGTGTTCTACCAAACACTCTTGAAGCGCGCCGTCTCGACACCAAAGGAAACATTTATGCTTTTGCAGTACTTCTATTGGAGATAATCAGTGGGAGACCTCCATACTGCAAGGACAAAGGGTACTTGGTGGATTGGGCTAGGGACTATCTTGAAATGCCAGAAGTAATGTCATATGTGGTGGATCCAGAGTTGAAACATTTTAGATATGAAGACCTCAAAGCAATATGTGAGGTGATAACTCTTTGCATCAGTTCTGATCCCTCTGTCCGTCCATCAATGCGTGAATTATGCACTATGCTGGAGAGCAGAATAGACACAACAATAAATTTGGAGCTAAAGGCATCATCACTGGCTTGGGCTGAGCTAGCACTTTCATCATAA 1971 0.3917 MKLYTSFLFLALVSMLSFVASVMVPKNEVLALKTFKEAVYEDPHMVLSNWNTLDSDLCDWNGVSCTATRDHVIKLNLSGASLRGFLAPEFGKITYLQELILHGNSLIGVIPKELGMLKSLKVLDLGMNQLTGPIPPEIGNLTQVMKINLQSNGLTGRLPPELGKLKYLQELRLDRNKLQGSLPGGGSSNFSSNMHGMYASGVNLTGFCRSSQLKVADFSCNFFVGSIPKCLAYLPRSSFQGNCLHIKDIKQRTSVQCAGASVVNPKYQPATKHVTKHQEASKPAWLLALEIVTGTMVGSLFIIAILTAIQRCNNKSSIIIPWKKSASGKDYMAVHIDSEMLKDVMRYNRQDLEVACEDFSNIIGSSPDSVVYKGTMKGGPEIAVISLCIREDNWTGYLELYFQREVADLARLNHDNTGKLLGYCRESNPFTRMLVFEYASNGTLYEHLHCYEEGCQLSWTRRMKIIIGIARGLKYLHTEIEPPFTISELNSNAVYLTEDFSPKLVDFESWKTILERSERNSGNVSSQGAVCVLPNTLEARRLDTKGNIYAFAVLLLEIISGRPPYCKDKGYLVDWARDYLEMPEVMSYVVDPELKHFRYEDLKAICEVITLCISSDPSVRPSMRELCTMLESRIDTTINLELKASSLAWAELALSS 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g02020 656 Gene3D Phosphorylase Kinase; domain 1 323 438 - -
Gma05g02020 656 Pfam Leucine rich repeat N-terminal domain 26 65 IPR013210 -
Gma05g02020 656 PANTHER PROTEIN MALE DISCOVERER 2 6 656 - -
Gma05g02020 656 SUPERFAMILY Protein kinase-like (PK-like) 336 631 IPR011009 -
Gma05g02020 656 SUPERFAMILY L domain-like 27 235 - -
Gma05g02020 656 ProSiteProfiles Protein kinase domain profile. 357 638 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma05g02020 656 Gene3D Transferase(Phosphotransferase) domain 1 439 645 - -
Gma05g02020 656 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 6 656 - -
Gma05g02020 656 Gene3D Ribonuclease Inhibitor 27 140 IPR032675 -
Gma05g02020 656 Gene3D Ribonuclease Inhibitor 141 257 IPR032675 -
Gma05g02020 656 Pfam Protein tyrosine and serine/threonine kinase 361 629 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g02020 Gma-Chr5 41531480 41536077 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g02020 3 631 Receptor kinase-like Gene Family AT2G01210 25.687 4.70e-56 201
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Gma05g02020 PK_Tyr_Ser-Thr 1.9e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g02020 - - gmx:100779744 1286.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g02020 05 41531480 41536077 Gma05g02020 05 41531480 41536077 ECH
Gma05g02020 05 41531480 41536077 Gma08g00125 08 1067146 1071369 GST
Gma01g02191 01 57174713 57178948 Gma05g02020 05 41531480 41536077 PCT
Gma11g00226 11 1763403 1768362 Gma05g02020 05 41531480 41536077 PCT