Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g02008 ATGCCTCAGGGAAGCCTTGAAGTTTTTCTTGTTAATGCCAAAGGCCTCGACAACACTGATTATCTTTgtaacatggacccttatgtgatcctcatatgtcgcactcaggagcaaaagagcagtgttgcaacagGTCACGGAAGTGAGCCAGAATGGAACGAGAATTTTGTATTCAACGTGTCTGAAGGCGTTTCCGATCTGAGATTGAAGATCATGGACAGTGATTCCACGACGGCTCATGATCTCGTCGGAGAAGCTACCATTCCActggatgcattgtatattgaaggaagtatccctccaacttcatacaatgttgtcaaggatggccactattgtggagagattaaaattggcctaacttttacgcctcagGATCGCAGCGAACGCTGCCTAGAGGAAAATTTTGGAGGATGGAAGGAGTCAGGCTACAGAGACTGA 441 0.2857 MPQGSLEVFLVNAKGLDNTDYLCNMDPYVILICRTQEQKSSVATGHGSEPEWNENFVFNVSEGVSDLRLKIMDSDSTTAHDLVGEATIPLDALYIEGSIPPTSYNVVKDGHYCGEIKIGLTFTPQDRSERCLEENFGGWKESGYRD 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g02008 146 PANTHER C2 DOMAIN-CONTAINING 1 142 - -
Gma05g02008 146 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 2 125 IPR035892 -
Gma05g02008 146 Gene3D C2 domain 2 125 IPR035892 -
Gma05g02008 146 PANTHER OS02G0640000 PROTEIN 1 142 - -
Gma05g02008 146 Pfam C2 domain 4 93 IPR000008 -
Gma05g02008 146 ProSiteProfiles C2 domain profile. 1 103 IPR000008 -
Gma05g02008 146 SMART C2_3c 5 102 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g02008 Gma-Chr5 41430954 41433356 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g02008 4 128 C2H2 Transcription Factor Family AT4G21160 27.200 1.01e-08 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g02008 - - gmx:100782974 306.219
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g02008 05 41430954 41433356 Gma08g00112 08 976813 977901 GST