Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g01986 ATGGAAAAGCTGAATTTTGTTAAAAATGGAGTGAGCAAATTGCCTCCTGGTTTTCGTTTTCAGCCAACAGATGAAGAGCTTGTTTTTCAATACTTGAAATGTAAGGTCTTCTCCTACCCCTTGCCTGCTTCTATCATTCCTGAGATCAATGTCTGCAAGTATGATCCTTGGGATTTGCCAGGGAATTGTGATCCACAAGAGAGGCACTTTTTCAGCCCGAAGGAAGCAAAGTATCGAAATGGTAATCGCATGAACCGAACGACAAAGTGTGGCTATTGGAAGGCAACAGGATCAGACAAAAGAATATCATCTTCAACTTCAACGTGTAATGGTATTGTTGGGGTACGAAAGACATTGATATTTTATGAGGGCAAATCACCAAAAGGCTCCAGAACTCACTGGGTCTTGCACGAATATCGTCTCGTCAGTGTAGAAACTGGTGCTGCCAACTCATCCCATGTAAAACTACGTAAACGAGATAGGAGATTGGGTTCTGTGTCGCTTATCGATGAAGAAAAGAAGTGTAGAAAGTGA 534 0.4195 MEKLNFVKNGVSKLPPGFRFQPTDEELVFQYLKCKVFSYPLPASIIPEINVCKYDPWDLPGNCDPQERHFFSPKEAKYRNGNRMNRTTKCGYWKATGSDKRISSSTSTCNGIVGVRKTLIFYEGKSPKGSRTHWVLHEYRLVSVETGAANSSHVKLRKRDRRLGSVSLIDEEKKCRK 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g01986 177 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 1 154 - -
Gma05g01986 177 Gene3D NAC domain 23 171 IPR036093 GO:0003677|GO:0006355
Gma05g01986 177 ProSiteProfiles NAC domain profile. 14 161 IPR003441 GO:0003677|GO:0006355
Gma05g01986 177 Pfam No apical meristem (NAM) protein 15 141 IPR003441 GO:0003677|GO:0006355
Gma05g01986 177 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 1 154 - -
Gma05g01986 177 SUPERFAMILY NAC domain 10 144 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g01986 Gma-Chr5 41196995 41198872 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g01986 1 141 NAC Transcription Factor Family AT5G13180 68.085 2.89e-65 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Gma05g01986 NAM 3.5e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g01986 - - gmx:100812015 328.176
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g01986 05 41196995 41198872 Gma05g01986 05 41196995 41198872 ECH
Gma05g01986 05 41196995 41198872 Gma08g00091 08 776051 777794 GST