Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g01976 ATGTGGGAGTGGACATTGCAGGGCAAAGGCCAAGAGAGGGAATTGGAACTCGAAAGTGACGAGTCTCAGGCTGAGATTGAAGCCCCATTGCCTCTCACTGTGACTTCTCGGGTTTTGTATATGTTGGGAGATATCACTGCAGGGCCTGCGTTTAGGTTCACGCAATGGCTCCAATTGGTTCGTAAACGCACCGCAAAGTATCGTTCTTCTGGCTTCCCTCACCGCACTTCCACCACCATGCCTTCTAGCTCTTGCATCAGAGAATCGTTGGAGAATTCAAAATTGGACCTGCATCCTGATCAGACAGAAATTAGCTTGTGGGAGAGGCTTGGGAAGGCTGCAATGTTGGACATTGAATCTGGCTCCTTTTCCTGGGACATGCTCTCTTCACTGCACCACACTGAACACAGCAGTAGCAATGAACATTCCGAGGATGAGATGAACAAAGCTCTCGAGGTAACTGTAAATTCTGGAGGAGTTGTCTTCTTTGCCTTTTTCAATATCTCTGGAAATGCTGATGCTTGCCCAAAAGAAGCAGCAGCTGTTATAAAGATAGCATCATCAAGAATGGCAACACAGTCTGAACGCCTTGGCTATGAATTTGCCAAGTGGATGGGAGTCCAAACTCCACAGGGTAGAGTCATTCACAATACCTGTTTAGAATGGCAACAAATAAAGGAGGCTGCAGAAAAAGCTAGAGAAGCAGCAAATTCTGAGGGTGATGAAATTGGTGAAGTGACATGTTTTGAACTTTTGGAAGCACTTGAGCTTAGCCGATGTCTATTTTTTATGAGTTATGTACATGGTTCACCCTTGCTTGAAAATTCCAGTGCATTTGAGTCAAGGGAATCTGCAGAAAGAACATCAGAAGCTCTTGGCAGGGTACTGATGTTGGACCTTGTCATCAGAAACGAAGATAGACTTCCTTGCCATGAGCTTAAATGGCGAGGAAATCCTGCAAATTTGTTGTTGGCTGGAAAGAATATCTGTGCAAATACAGATGCACTAGAATCAGCTTTTGATTCTGCAGTTAACCGATATAGACCAAAGGTGATCAGGGCATTTCAGAAAGAAAGAAGGTCAACTTCAGTAGATTGCAGACTCAATTCTCATAATCCCGGCTTGATATCACAATCTTATGATCTCTCAGACATCACAGAATCACCAAGATCTGCTGACATGAGCTTTCAAACATCAGGAGAATCACTGTCTCCCGACTTTAACATTGTAGCTATTGATTCTGGTGTTCCTTGGCGACCTCCTGCTGGAAAACGTGCAAATGATCAGGTTAATTATCCTAAGTTGGTTGAGTTGCTGGTCAATAGTTCTGAATTTGCCTCTAACCTGTTATATGATATAACTGGGGGGAAATTAGGATGTCCCCCACCGGAAGACATGGAAAAAACTTATGTACATACAAGTGACACAATGTTTGTAGTTCACGCATTCCGTAATGGTTTCCGTGCTGCTCTTAGAGATCTGCAGGGATTCCATATATTCCTACTCACACTTCACCAAAGACTTGATACTTTGTTACGATCATTTATGAACATTATTAGCAAAATATCTTTGGGGGAATTTGACAAAGAAGATTCTGTGGTTCCTGACTCACTTTCACTGACTGCTGGCGGGAGTTGTTCCTCTCCAACATGTAAGGAAAGGCTTGCTAATGATAACCATCAAGATTTTATTGATTCAGAATCACAGAGAACTGCTTCAAGAGCTTCATCTTCAGGCAATAGAGATTGCAGTGACTCTACTCCTATGTCAAGAGAAACTTGGCATGGAAAGTTCTATAAAGGAAATGGGGAACCACTTCGTAGTCTCCGTTTGACTGCTAAGCTCCGTGACTTCCATAAATTTGCCAAGGTTGATGCTGAATCCAGTAAAGAATTGGAACAGTGGAATGAAATGCTTAAAAGCGATGCCATCAAACTATGCCAGGAGAACAATTTCAACCCAGGATTTTTTGAGGGTAGTGATAATAACTGTGTCGTTGATGCATATGAACTTAAGGTTAGACTTGAGCATATTCTCGAGAGAATTGCATTGATATCAGATGCTGCAAGTACTGAGAAACCTTCAGCAGTGACAAGTAGTCTGTTCATTGGTGGAGCACTGGCTGCAAGATCTGTATACACACTGCAATACTTGGGAATCACAAATATTTTGTGTTTGTGTACCAATGAAATTGGACAGTCAGAAACTCAGTATCCTGATCTATTTGAGTACAAGAATTTCTCTGTATGTGACAGTGATGATTATAACATCAGCAGCATATTTGAAGAAGCGTGTGATCTTATAGACTTTGTTGAACAAACAGGTCAAAAAGTTTTAGTTCATTGCTTTGAGGGGAGAAGCAGAAGTGTCACGTTGGTCCTCGCTTACTTAATGCTCAGGAAGAAGTATACTTTATCACAAGCATGGCAAGCTTTGAAACGAGTTCACCGTCGAGCACAACCCAATGATGGTTTTGCAAAGATCTTGTTAGAACTGGATCAGAAACTACATGGAAAGGTTTCGATGGAATGGCATCAGCGGAAACCAGTGATGAAAGTCTGCCCCATATGTGGGAATAATGCTGGACTAAGCAGCAGCTCACTCAAACTACATCTGCAGAAATCACATAGAAAGCTATCATCTGGGAGTGTAGATAGTGCCATGACTATGGAAATCCAGAAAGCATTAACAGCTTTGAAGATTAGCCGTGGTGGGAGTGTCAGCCCCACACAAAGATCATCTCATCCACTGATAGATCAATAG 2763 0.4238 MWEWTLQGKGQERELELESDESQAEIEAPLPLTVTSRVLYMLGDITAGPAFRFTQWLQLVRKRTAKYRSSGFPHRTSTTMPSSSCIRESLENSKLDLHPDQTEISLWERLGKAAMLDIESGSFSWDMLSSLHHTEHSSSNEHSEDEMNKALEVTVNSGGVVFFAFFNISGNADACPKEAAAVIKIASSRMATQSERLGYEFAKWMGVQTPQGRVIHNTCLEWQQIKEAAEKAREAANSEGDEIGEVTCFELLEALELSRCLFFMSYVHGSPLLENSSAFESRESAERTSEALGRVLMLDLVIRNEDRLPCHELKWRGNPANLLLAGKNICANTDALESAFDSAVNRYRPKVIRAFQKERRSTSVDCRLNSHNPGLISQSYDLSDITESPRSADMSFQTSGESLSPDFNIVAIDSGVPWRPPAGKRANDQVNYPKLVELLVNSSEFASNLLYDITGGKLGCPPPEDMEKTYVHTSDTMFVVHAFRNGFRAALRDLQGFHIFLLTLHQRLDTLLRSFMNIISKISLGEFDKEDSVVPDSLSLTAGGSCSSPTCKERLANDNHQDFIDSESQRTASRASSSGNRDCSDSTPMSRETWHGKFYKGNGEPLRSLRLTAKLRDFHKFAKVDAESSKELEQWNEMLKSDAIKLCQENNFNPGFFEGSDNNCVVDAYELKVRLEHILERIALISDAASTEKPSAVTSSLFIGGALAARSVYTLQYLGITNILCLCTNEIGQSETQYPDLFEYKNFSVCDSDDYNISSIFEEACDLIDFVEQTGQKVLVHCFEGRSRSVTLVLAYLMLRKKYTLSQAWQALKRVHRRAQPNDGFAKILLELDQKLHGKVSMEWHQRKPVMKVCPICGNNAGLSSSSLKLHLQKSHRKLSSGSVDSAMTMEIQKALTALKISRGGSVSPTQRSSHPLIDQ 920
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g01976 920 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE PHS1 7 920 IPR035010 GO:0004721|GO:0009737|GO:0043622
Gma05g01976 920 SUPERFAMILY Protein kinase-like (PK-like) 55 429 IPR011009 -
Gma05g01976 920 MobiDBLite consensus disorder prediction 562 597 - -
Gma05g01976 920 Gene3D - 272 377 IPR036940 GO:0016301
Gma05g01976 920 Gene3D Protein tyrosine phosphatase superfamily 676 848 IPR029021 -
Gma05g01976 920 Pfam Actin-fragmin kinase, catalytic 103 381 IPR015275 -
Gma05g01976 920 CDD DSP 694 831 - -
Gma05g01976 920 MobiDBLite consensus disorder prediction 568 591 - -
Gma05g01976 920 ProSiteProfiles Dual specificity protein phosphatase domain profile. 693 838 IPR020422 GO:0006470|GO:0008138
Gma05g01976 920 Pfam Dual specificity phosphatase, catalytic domain 714 834 IPR000340 GO:0008138|GO:0016311
Gma05g01976 920 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 762 814 IPR000387 GO:0016311|GO:0016791
Gma05g01976 920 PANTHER DUAL SPECIFICITY PHOSPHATASE FAMILY PROTEIN 7 920 - -
Gma05g01976 920 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 693 838 IPR029021 -
Gma05g01976 920 SMART dsp_5 693 835 IPR020422 GO:0006470|GO:0008138
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g01976 Gma-Chr5 41105793 41112459 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g01976 7 916 Protein tyrosine phosphatase (PTP) family AT5G23720 64.208 0.0 1129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g01976 K14165 - gmx:100791993 1754.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g01976 05 41105793 41112459 Gma05g01976 05 41105793 41112459 ECH
Gma05g01976 05 41105793 41112459 Gma08g00080 08 690564 697645 GST