Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g01969 ATGGCACAAGATTCAGAGAAAATTTGTGAAGGTGCTTCGGAGTCTCCAACGACCCCAGTTGGAACACAagcaccagcaccagcaccagcaccaCCAGAGAGTGAACCCAAAAGCACTCCAACTCAAAGAATCAAAGCCACAAGGCACCCTAGATGGACAAGGCAAGAAACACTTGTTCTGATAGAGTCCAAGAAAATGGTGGAAAATGGAGAACAAGTTTGCCGATTCAGATCAGCATCAGGGTGCGTTCAAACCGATCCGAAATGGGACATGGTGTCATCACTGTGTCAGCAGAGAGGGGTGAAGAGAGGGGCTGTTCAGTGCAGGAAAAGGTGGGGCAATCTTCTCACTGATTTCAGGAAGATCAAGAAGTGGGAATCTGGTGTAAAAGAGGTGGAGAGTGAGTCGTTTTGGATAATGAGAAATGATGTGAGGAAGGAGAAGAAGTTGCCCGGGTTCTTTGATTCTGTGGTGTACAATGTTTTGGATGGAGGGGTGTGCACCACTGTTGCATTTCCCTTGACACTGGTTAAGATGGTGCCAAAGGGTGAGAATGGTGTTGTTGTTGAGGGAGTGTCTCATCATCAGGAACAGTGTAAGGAGAACgaggaggaagaagaggaggaggaggaggaggaggaggatgaggCGATTGTTGATGCTGAGAAAATGGGTTGGAGCACTGAGGAGGAAAACATGGAGACTAACATCAATGGTTTTCTTAAAACACCAACAGGTCTTCTTATTAAGGAAAAAGGTATTGCAGGGAGGCTCAAGAGGACACCCATACTCACATTGCCTACTCCAGCAGAGAAACTACAGCAGCAGCCATCTTACCAAGGGAACTACGATCCTGGTTTTCAGAAGGAACCTATGTTCCAAGAGGGATACAAGAGAAAGAGGTTACCGTTGGATAGTAGTGAGGACTGCACAGATTTCAACAGCAACATTACCAATCTACTAAGGAGGAACAGTGACATGCTAAAAGCCCATCTTGGGGCTCAGAACATAAATTACCAATTGGCCAGGGACCAGCAGAAACAACAAACTGATATTATAGTTGCAGCCCTTGGCAAGCTCACAGATGCCCTCACAAAAATTGCTGACAAGCTGTAA 1116 0.4292 MAQDSEKICEGASESPTTPVGTQAPAPAPAPPESEPKSTPTQRIKATRHPRWTRQETLVLIESKKMVENGEQVCRFRSASGCVQTDPKWDMVSSLCQQRGVKRGAVQCRKRWGNLLTDFRKIKKWESGVKEVESESFWIMRNDVRKEKKLPGFFDSVVYNVLDGGVCTTVAFPLTLVKMVPKGENGVVVEGVSHHQEQCKENEEEEEEEEEEEEDEAIVDAEKMGWSTEEENMETNINGFLKTPTGLLIKEKGIAGRLKRTPILTLPTPAEKLQQQPSYQGNYDPGFQKEPMFQEGYKRKRLPLDSSEDCTDFNSNITNLLRRNSDMLKAHLGAQNINYQLARDQQKQQTDIIVAALGKLTDALTKIADKL 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g01969 371 Pfam Myb/SANT-like DNA-binding domain 50 133 IPR044822 -
Gma05g01969 371 PANTHER MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN 38 371 - -
Gma05g01969 371 Gene3D - 52 121 - -
Gma05g01969 371 ProSiteProfiles Myb-like domain profile. 51 116 IPR001005 -
Gma05g01969 371 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASR3 38 371 - -
Gma05g01969 371 MobiDBLite consensus disorder prediction 202 218 - -
Gma05g01969 371 MobiDBLite consensus disorder prediction 22 36 - -
Gma05g01969 371 Coils Coil 192 224 - -
Gma05g01969 371 MobiDBLite consensus disorder prediction 193 218 - -
Gma05g01969 371 MobiDBLite consensus disorder prediction 1 50 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g01969 Gma-Chr5 41024246 41026536 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g01969 51 138 Trihelix Transcription Factor Family AT5G03680 31.461 1.22e-06 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g01969 - - gmx:100793052 688.337
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g01969 05 41024246 41026536 Gma05g01969 05 41024246 41026536 ECH
Gma05g01969 05 41024246 41026536 Gma08g00072 08 624193 626526 GST