Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g01963 ATGGCCCTGCAGGCACCTAGCTTTCACATCGTCAATGGCAATGCTTGCCTGAGACGACCCTTGATGAACCCTTTTGCTCTAAAGTCATCCTTCTTCTCTGGTTCCCTCAATCTCTATCTTCATCCCAATCACCACCATCTTACTTCAGCTCCACCCAGGATTTCCATGCGCGTCGCTTCCAAACAGGCCTATATCTGTCGCGATTGCGGGTATATTTACAAAGACAGAACTCCCTTTGAGAAGTTGCCTGATAACTACTTCTGCCCTGTTTGTGGTGCTCCAAAGCGAAGATTTAGGGCCTATGCACCGGCTGTCACTAAAAATGACAATGACACAGCTGTTAGAAAGGCACGAAAAGCAGAACTACAGAGAGATGAAGCAATTGGGAAGGCATTTCCTATTGCAATTGTCGTGGGAATTGCAGTGCTTGCAGGATTATATTTCTATCTGAACAGCCAATACTAG 465 0.4624 MALQAPSFHIVNGNACLRRPLMNPFALKSSFFSGSLNLYLHPNHHHLTSAPPRISMRVASKQAYICRDCGYIYKDRTPFEKLPDNYFCPVCGAPKRRFRAYAPAVTKNDNDTAVRKARKAELQRDEAIGKAFPIAIVVGIAVLAGLYFYLNSQY 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g01963 154 CDD rubredoxin 64 98 IPR024935 GO:0005506
Gma05g01963 154 ProSiteProfiles Rubredoxin-like domain profile. 61 101 IPR024934 GO:0005506
Gma05g01963 154 Gene3D - 61 100 - -
Gma05g01963 154 Pfam Rubredoxin 64 98 IPR024935 GO:0005506
Gma05g01963 154 PANTHER RUBREDOXIN-LIKE SUPERFAMILY PROTEIN 10 154 - -
Gma05g01963 154 SUPERFAMILY Rubredoxin-like 61 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g01963 Gma-Chr5 40953542 40955416 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Gma05g01963 Rubredoxin 1.5e-05 CL0045
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g01963 - - gmx:100812204 314.694
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g01963 05 40953542 40955416 Gma05g01963 05 40953542 40955416 ECH
Gma05g01963 05 40953542 40955416 Gma08g00066 08 554030 555441 GST
Gma05g01963 05 40953542 40955416 Gma04g01957 04 50022004 50023577 PCT
Gma05g01963 05 40953542 40955416 Gma06g01452 06 13826750 13827656 PCT
Gma04g01957 04 50022004 50023577 Gma05g01963 05 40953542 40955416 PCT
Gma06g01452 06 13826750 13827656 Gma05g01963 05 40953542 40955416 PCT