Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g01937 ATGCGTGGAGCTGTGTATTGGGAACCCAACAAGCCTCTCACCATCGAGGAATTTAACATGCCTCGCCCCAAGGCCGGTGAAGTTCTCATCAAAACCAAAGCCTGTGGAGTATGCCACTCTGATCTACATGTTATGAAAGGTGAAATTCCGTTTTCCAGTCCTTGTGTTTTGGGGCATGAGATTACCGGTGAGGTTGTTGAACATGGAGCACTCACTGACAGCAAAACCATAGAAAGGCTTCCAGTTGGATCTCGAGTTGTTGGGGCCTTCATCATGCCTTGTGGCAACTGCTCCTACTGTTCAAAGGGCCATGATGATCTATGTGAAGCTTTCTTTGCCTATAACCGGGCAAAAGGAACCCTCTATGATGGTGAAACTCGACTTTTTTTTCGAAACAGTGGAAAACCAGCATTCATGTATAGTATGGGAGGGCTTGCTGAATACTGCGTTGTGCCAGCAAATGGAGTGTCTGTATTACCAGACTCATTGCCATATACAGAGTCTGCAATTCTAGGATGTGCTGTTTTTACTGCTTACGGCGCTATGGCTCATGCAGCTCAAGTGCGTCCTGGTGATTCTGTTGCTGTTATTGGAACTGGAGGTGTTGGTTCTAGTTGTTTACAGATAGCTAGAGCCTTTGGTGCCTCAGATATAATTGCTGTGGATGTACGGGATGAAAAGCTACAGAAAGCAAAGACATTTGGTGCTACTCACACTGTAAATTCAGCAAAGGAAGATCCCATTGAAAAGATACTTGAAATTACTGGTGGAAAGGGTGTTGATGTTGCTGTGGAAGCCTTGGGGAAACCACAGACATTTGCTCAGTGCACACAAAGTGTGAAGGATGGGGGGAAAGCTGTGATGATTGGACTGGCACAAGCTGGTTCTTTAGGAGAGGTGGATATAAATCGGCTTGTTCGCCGAAAGATACAAGTTATTGGCTCATATGGAGGCAGAGCGAGGCAAGATCTTCCTAAGTTAATTAGACTGGCAGAAACAGGAATCTTCAATCTTGGTCATGCTGTTTCTAGAACATACACCTTTGACGAGGCAGGAAAAGCATTCCAAGATCTCAATGAAGGAAAAATTGTCGGTCGAGCTGTGATCGAGATAATATAG 1119 0.4513 MRGAVYWEPNKPLTIEEFNMPRPKAGEVLIKTKACGVCHSDLHVMKGEIPFSSPCVLGHEITGEVVEHGALTDSKTIERLPVGSRVVGAFIMPCGNCSYCSKGHDDLCEAFFAYNRAKGTLYDGETRLFFRNSGKPAFMYSMGGLAEYCVVPANGVSVLPDSLPYTESAILGCAVFTAYGAMAHAAQVRPGDSVAVIGTGGVGSSCLQIARAFGASDIIAVDVRDEKLQKAKTFGATHTVNSAKEDPIEKILEITGGKGVDVAVEALGKPQTFAQCTQSVKDGGKAVMIGLAQAGSLGEVDINRLVRRKIQVIGSYGGRARQDLPKLIRLAETGIFNLGHAVSRTYTFDEAGKAFQDLNEGKIVGRAVIEII 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g01937 372 SMART PKS_ER_names_mod 8 369 IPR020843 GO:0016491
Gma05g01937 372 Gene3D - 5 361 - -
Gma05g01937 372 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 163 336 IPR036291 -
Gma05g01937 372 Gene3D - 178 315 - -
Gma05g01937 372 PANTHER NAD-DEPENDENT ALCOHOL DEHYDROGENASE 1 370 - -
Gma05g01937 372 Pfam Zinc-binding dehydrogenase 201 332 IPR013149 -
Gma05g01937 372 Pfam Alcohol dehydrogenase GroES-like domain 26 156 IPR013154 -
Gma05g01937 372 CDD Zn_ADH10 1 370 - -
Gma05g01937 372 SUPERFAMILY GroES-like 1 204 IPR011032 -
Gma05g01937 372 PANTHER NAD-DEPENDENT ALCOHOL DEHYDROGENASE 1 370 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g01937 Gma-Chr5 40768643 40775649 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g01937 15 371 Monolignol Biosynthesis Gene Families AT4G37990 26.593 5.39e-20 88.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g01937 - - gmx:100802431 746.888
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g01937 05 40768643 40775649 Gma05g01937 05 40768643 40775649 ECH
Gma05g01937 05 40768643 40775649 Gma08g00046 08 383311 387710 GST