Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g01897 ATGATGCAAGGCTGTGAGGTTGATGCCATTGGCATAAACTACACGATCCACACACACAAATCGGAGCACCCTTTTAAAATCTTCAGCAACAAATCTGCACATCTTGACACTGAACAAGATGGTAAAGAGCCAGAAGAGGAAGCAGAAGTTGAACAAAGTTGCAGTGGAGTAAGGCATGTGCTGAAGAATGTGAGTTTCCAAGCCAAGCCATGGGAGATCCTAGCAATTGTTGGGCCAAGTGGAGCTGGCAAATCATCACTGCTTGAGATTCTTGCTGGTAAACACAGCCCTCAAAGTGGAACTGTGTTTCTGAACCACAAGCCTGTAGACAAAGCTCAGTTCAGGAAGCTTTCAGGGGTCAAGTCACTGATTCAGGAGCTTGGACTTGACAATGTTGCTGGCACTAGAATTGGTGATGATAGGGTCCGAGGCATATCTGGTGGTGAGAGGCGCAGAGTCTCCATTGGTGTTGAAGTCATTCATGATCCAAAAGTGCTGATTCTTGATGAACCAACTTCAGGGCTTGACAGTACTTCAGCTTTGCAAATAATTGACATGCTTAAGGTCATGGCCGACACAAGAGGGAGAACCATAATCCTTAGTATTCACCAACCCGGGTTCAGAATAGTGAAGCTGTTCAATTCATTGTTGCTGTTGGCCAATGGAAGTGTTTTGCACCACGGAACAGCTGATTTGCTTAGTGTGAATCTAAGGCTGATGGGTCTGGAGCTTCCTCTTCATGTCAATGTAGTTGAATTTGCCATTGAGTCCATTGATACCATTCAGCAGCAACAGAAATGTGTGCCAGTTCAGGTAGAAACTCCAAGGCAACTGCCAGGGACAATACTACAGAAGAAAGGTGGTGATGGTGAAGCAGGTGAGGGTAGGAATGGTAAGCTCACTTTGCAACAGCTCTTTCAGCAATCCAAGGTAATTGATGAACAAACCATGTATGCTGGAATGGATTTCACTAGTGAGTTTGCTAATTCTAGATTGAGAGAAACTATGATTCTCAGTCATAGGTTCTCCATGAACATATTCCGTACAAAAGAGCTATTTGCATGCAGGACAGTTCAGATGCTGGTTTCTGGGCTGGTTGTGGGGTCCATCTTTTGTAACCTTAAGGATGATCTAGAGGGAGCTTTTGAAAGGGTGGGTCTATTTGCTTTCATATTAACGTTTTTATTGTCAAGCAGCATAGAAGCTCTACCAATTTTTCTGCAAGAAAGGGAGATTCTAATGAAGGAGACATCTTGTGGAAGCTATCGTGTGTCATCCTATGCTATTGCAAATGGCCTAGTTTACTTGCCATTTCTTCTCATCCTAGCCATTTTGTTCTCAATGCCCTTGTACTGGCTTGTAGGGCTCAACCGGAACTTCTTGGCTTTTTTGCACTTTCTGTTGCTGATATGGCTGATTCTTTACACGGCCAATTCAGTTGTGGTGTGTTTCAGTGCTCTGGTGCCTAATTTTATTGTTGGGAACTCAGTGATTGCTGGTGTTATAGGGTCATTCTTCTTATTCTCTGGATACTTCATATCAAAACAGGAAATTCCAAATTACTGGATTTTCATGCATTATATATCCTTGTTTAAGTATCCCTTTGAAGGGTTCCTGATCAATGAGTTCTCCAACTCGGGGAAGTGCTTGGAATACATGTTTGGGGCATGTATAAAGAGCGGAGAGGATGTGCTTAAAGAAGAAGGGTACGGGGGAGAGAGTAATAGATGGAAGAATGTTGGGGTCACTGTGTGCTTCATCTTGGTTTACAGGTTCATTTCTTATGTTATTCTTAGATACAGATGTTCCCAGAGGGGATTTGGCAGGGTTGTCACCAACTAA 1842 0.4332 MMQGCEVDAIGINYTIHTHKSEHPFKIFSNKSAHLDTEQDGKEPEEEAEVEQSCSGVRHVLKNVSFQAKPWEILAIVGPSGAGKSSLLEILAGKHSPQSGTVFLNHKPVDKAQFRKLSGVKSLIQELGLDNVAGTRIGDDRVRGISGGERRRVSIGVEVIHDPKVLILDEPTSGLDSTSALQIIDMLKVMADTRGRTIILSIHQPGFRIVKLFNSLLLLANGSVLHHGTADLLSVNLRLMGLELPLHVNVVEFAIESIDTIQQQQKCVPVQVETPRQLPGTILQKKGGDGEAGEGRNGKLTLQQLFQQSKVIDEQTMYAGMDFTSEFANSRLRETMILSHRFSMNIFRTKELFACRTVQMLVSGLVVGSIFCNLKDDLEGAFERVGLFAFILTFLLSSSIEALPIFLQEREILMKETSCGSYRVSSYAIANGLVYLPFLLILAILFSMPLYWLVGLNRNFLAFLHFLLLIWLILYTANSVVVCFSALVPNFIVGNSVIAGVIGSFFLFSGYFISKQEIPNYWIFMHYISLFKYPFEGFLINEFSNSGKCLEYMFGACIKSGEDVLKEEGYGGESNRWKNVGVTVCFILVYRFISYVILRYRCSQRGFGRVVTN 613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g01897 613 Pfam ABC transporter 61 113 IPR003439 GO:0005524
Gma05g01897 613 SMART AAA_5 70 223 IPR003593 -
Gma05g01897 613 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 3 119 - -
Gma05g01897 613 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 119 601 - -
Gma05g01897 613 Pfam ABC transporter 121 173 IPR003439 GO:0005524
Gma05g01897 613 ProSitePatterns ABC transporters family signature. 145 159 IPR017871 GO:0005524
Gma05g01897 613 PANTHER ABC TRANSPORTER G FAMILY MEMBER 5 3 119 - -
Gma05g01897 613 PANTHER ABC TRANSPORTER G FAMILY MEMBER 5 119 601 - -
Gma05g01897 613 Gene3D - 115 268 IPR027417 -
Gma05g01897 613 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 45 246 IPR003439 GO:0005524
Gma05g01897 613 Gene3D - 45 114 IPR027417 -
Gma05g01897 613 Pfam ABC-2 type transporter 335 543 IPR013525 GO:0016020|GO:0140359
Gma05g01897 613 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 58 234 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g01897 Gma-Chr5 40400511 40402460 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g01897 59 251 Calmodulin-binding Proteins AT2G36910 23.207 7.47e-11 63.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g01897 K05681 - gmx:100789722 1165.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g01897 05 40400511 40402460 Gma08g00007 08 60717 63099 GST