Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g01874 ATGATGGTTGCTTCTCTCTTCTACCTTTCTCTTTCTCTTTCCCTCATCCTAACCCTCTCCTCCGCCGCGCACCACAAACCCCCCCACTCACCGTCCAAGCCACCGGCTAACCCCGCCGTGACCGCCGCCTCCCCGGCAATCGAACAAGCCTGCGCCGCGACGCTCTTCCCGCAGCAATGCGAAGCCTCTCTCTCCCAATCCCAGAACCTCCCTCCGAACCCGACCCCTCTCCAGCTCCTCCAGTCCGCCATCGCCCTCTCCTCCGATAACCTCGCCACCGCGCAGACCATGGCTAAGTCCCTCCTCGACGCCTCCGCCGACAGCCGCAACCGCACCGTCGCCGCCGCCACCTGCATCGAGATATTAGCCAATTCCCATCACCGCATTTCCCTTGCCTCCGACGCGCTCCCACGCGGCAGGACCAAGGACGCGCGTGCGTGGCTGGGCGCCGCACTCGCCTACCAGTACGACTGCTGGAACAGCCTAAAATACGCCAACGACACCCAAATGGTCGGCAAAACGATGTCGTTCATCGATAACCTCGAAATTCTCTCCAGCAACGCCCTCAGCATGGCCTTTTCCTTCGATGCCTTCGGAAACGACATCGCTTCGTGGAAGCCCCCCGCGACGGAGCGCGTCGGATTCTGGGGGACTGTGGGGTCGGGTGGGCCCGGGCCCGCGGGAGGGGTTCCGTTGAATTTGACGCCCGACGTTACGGTGTGTAAGAATGGAGGGGATGGCTGTTATAAGACGGTGCAAGAGGCCGTTAACGCCGCGCCGGATAACGGCAACCGAACGAAGAGGTTTGTGATACACATTAAAGAAGGGGTTTATCAGGAGACCGTTAGGGTTCCGTTAGCGAAGAGGAATGTGGTGTTCTTGGGGGACGGCATCGGCAAGACGGTCATCACCGGCGACGCCAACGTCGGGCAACAAGGGATGACAACTTACAACTCTGCCACCGTCGCGGTTCTTGGCGATGGATTCATGGCAAAGGATCTGACGATCGAAAACACAGCAGGTCCTGACGCTCACCAAGCAGTGGCATTCAGATTAGACAGTGATCTTTCTGTGATTGAGAATTGCGAATTCTTAGGCAATCAAGACACTCTCTATGCTCACTCACTGCGCCAATTCTACAAGTCATGCAGAATTGAGGGCAACGTGGACTTCATCTTTGGAAACGCTGCAGCAATTTTCCAAGACTGCCAAATCCTAGTTCGTCCCAGGCAAGTGAAGCCAGAGAAGGGTGAGAACAATGCTATCACAGCACATGGCAGAACAGACCCTGCACAACCCACAGGCTTTGTTTTCCAGAACTGCTTGATTAATGGCACTGAGGAATATATGACATTGTACCACAGCAAGCCTCAGGTGCATAAGAACTATTTGGGTAGGCCTTGGAAGGAGTATTCTAGAACAGTTTTCATTAATTCGTTCTTGGAGGTCCTTGTGACACCCCAGGGTTGGATGCCATGGAGTGGTGACTTTGCTCTCAAGACACTTTACTATGGGGAGTTTGAGAGCAAGGGTCCTGGCTCTTATTTGTCTCAGAGGGTGCCCTGGAGTAGCAAGATCCCTGCTGAACACGTGTTAACGTATTCAGTGCAGAATTTCATTCAAGGAAATGATTGGATTCCATCTATTGGTAGCCCATCGTCGTAA 1665 0.5489 MMVASLFYLSLSLSLILTLSSAAHHKPPHSPSKPPANPAVTAASPAIEQACAATLFPQQCEASLSQSQNLPPNPTPLQLLQSAIALSSDNLATAQTMAKSLLDASADSRNRTVAAATCIEILANSHHRISLASDALPRGRTKDARAWLGAALAYQYDCWNSLKYANDTQMVGKTMSFIDNLEILSSNALSMAFSFDAFGNDIASWKPPATERVGFWGTVGSGGPGPAGGVPLNLTPDVTVCKNGGDGCYKTVQEAVNAAPDNGNRTKRFVIHIKEGVYQETVRVPLAKRNVVFLGDGIGKTVITGDANVGQQGMTTYNSATVAVLGDGFMAKDLTIENTAGPDAHQAVAFRLDSDLSVIENCEFLGNQDTLYAHSLRQFYKSCRIEGNVDFIFGNAAAIFQDCQILVRPRQVKPEKGENNAITAHGRTDPAQPTGFVFQNCLINGTEEYMTLYHSKPQVHKNYLGRPWKEYSRTVFINSFLEVLVTPQGWMPWSGDFALKTLYYGEFESKGPGSYLSQRVPWSSKIPAEHVLTYSVQNFIQGNDWIPSIGSPSS 554
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Gma05g01874 554 SMART PMEI_2 42 191 IPR006501 GO:0004857
Gma05g01874 554 CDD PMEI-like_3 50 191 - -
Gma05g01874 554 Gene3D Invertase/pectin methylesterase inhibitor family protein 45 194 IPR035513 -
Gma05g01874 554 TIGRFAM PME_inhib: pectinesterase inhibitor domain 11 190 IPR006501 GO:0004857
Gma05g01874 554 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 13 548 - -
Gma05g01874 554 PANTHER PECTINESTERASE 13 548 - -
Gma05g01874 554 SUPERFAMILY Pectin lyase-like 236 552 IPR011050 -
Gma05g01874 554 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 45 191 IPR035513 -
Gma05g01874 554 Gene3D - 232 554 IPR012334 -
Gma05g01874 554 Pfam Plant invertase/pectin methylesterase inhibitor 46 191 IPR006501 GO:0004857
Gma05g01874 554 Pfam Pectinesterase 237 543 IPR000070 GO:0030599|GO:0042545
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Gma05g01874 Gma-Chr5 40200849 40203339 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g01874 35 545 Carbohydrate Esterase AT5G09760 64.217 0.0 689
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g01874 - - gmx:100819675 1036.94