Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g01865 ATGAGTTTGACGGGTGCAGGGCATTTGGAGCCCCCTGATCCTGATGTCCTTGACATTGATCCAACTTGTCGCTACATCAAGGATATATGCAATGTGTTTTGTGTCAATGGAATTGAAGTTTCGTGGAGCCTGGTTCAGATTGACGAGGTGTTAAAGTCACCGGCTGACTTAGAGAGACTGTACTCAGAAGTGCATCTCCTGAGTTCATTAAAGCACAATAACGCAGTCAGGTTCTACAATTCCTGGATTTTGATGACAAGCGCAAGACGAGTTGTTGACTTGAAGGCTATTAAAGGATGGGCAAGACAGATTTTAATGGGTTTAAACTATCCCCACAGTCATAACCCACCCGTTATGCATAGGGACCTGAAAGGTGATAATATATTTATCAATGGCCACCAAGGAGAAGTTAAAATTGGGGATTTGGGCCTGACAACTTTCTTGGAGCGAAGTAATTCCAAGAGTATAATTGGAACCCCGGAGTTCATGGCACCTGAGCTGTATGATGAAAATTACAATGAATTAGCTGACATATATTCATTTGGTATGTGCATACTGGAGTTGGTGACTTCTGAATATCCTTATAGTGAATGTAGAAACTCAGCTCAGATATACAAGAAAGTTTCATCTTCCCAGCATCCCAAAGATTGTCAGCCGATGGACCCATTTCTTCAAATGAATGGTTCAACAAATAATGGTTTTTTTCCATTGTTAGATATTGTTCTTCCCAAATTTGGAGCCTTTGAAAGTCGTTGTATGCTATCAGAAGGTCGTGCAAGTGCACATAAAGGAGACATTTCAATGGGTCTTGGTGACACCAGTGAGCTTCCAATGAGAATTCTGTATCATTAG 852 0.412 MSLTGAGHLEPPDPDVLDIDPTCRYIKDICNVFCVNGIEVSWSLVQIDEVLKSPADLERLYSEVHLLSSLKHNNAVRFYNSWILMTSARRVVDLKAIKGWARQILMGLNYPHSHNPPVMHRDLKGDNIFINGHQGEVKIGDLGLTTFLERSNSKSIIGTPEFMAPELYDENYNELADIYSFGMCILELVTSEYPYSECRNSAQIYKKVSSSQHPKDCQPMDPFLQMNGSTNNGFFPLLDIVLPKFGAFESRCMLSEGRASAHKGDISMGLGDTSELPMRILYH 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g01865 283 ProSiteProfiles Protein kinase domain profile. 1 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma05g01865 283 SUPERFAMILY Protein kinase-like (PK-like) 53 219 IPR011009 -
Gma05g01865 283 SMART serkin_6 25 235 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma05g01865 283 Gene3D Phosphorylase Kinase; domain 1 32 89 - -
Gma05g01865 283 Gene3D Transferase(Phosphotransferase) domain 1 90 245 - -
Gma05g01865 283 Pfam Protein kinase domain 60 210 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma05g01865 283 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 4 214 - -
Gma05g01865 283 ProSitePatterns Serine/Threonine protein kinases active-site signature. 118 130 IPR008271 GO:0004672|GO:0006468
Gma05g01865 283 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK6-RELATED 4 214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g01865 Gma-Chr5 40098407 40101430 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g01865 94 280 MAP Kinase Kinase Kinase AT1G49160 57.477 1.97e-78 242
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Gma05g01865 Pkinase 1.4e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g01865 K08867 - gmx:121175054 360.918