Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g01860 ATGACGAGATCGAAGCCGCGCGCTTGGAAGTTGCGACAGAGGTCGGAAGTTGAAGATTCTCCTAAGTTCGGCGTGACGTCAGTTTGCAGCAGGAGAAGAGATATGGAAGATTCTGTTTTGGTGCAGCCTTCCTTCACCCAAGGCTTCCACTACTTTGGCATTTTCGATGGTCACGGTTGCTCTCATGTTGCAACTATGTGCAAGGAGCGGTTACACGAGATCGTGAATGAAGAAATTGACAGCGCGCACGAGAATTTGGAGTGGAAGCTAACAATGGAGAATAGATTTGCTCGCATGGACGACGAGGTTAATTGCAAGAGTCAGAGCAACCAGACCTTCACTTGCAGGTGCGAGCTCCAGACTCCCCATTGCGACGCCGTCGGATTCACCGTCGCCATCGTCACGCCGGACAAACTTGTCGTCTCCAACTGCGGCGACTCCCGCACCGTCCTCTGCCAGAAAGGCGTAGTCATCCCTCTCTCCTCTGGTCACAAGAGCTTGGCTTTGCTTATCGATTCTCTCTCCTCTCATCTTTCTCATTCAAG 545 0.5193 MTRSKPRAWKLRQRSEVEDSPKFGVTSVCSRRRDMEDSVLVQPSFTQGFHYFGIFDGHGCSHVATMCKERLHEIVNEEIDSAHENLEWKLTMENRFARMDDEVNCKSQSNQTFTCRCELQTPHCDAVGFTVAIVTPDKLVVSNCGDSRTVLCQKGVVIPLSSGHKSLALLIDSLSSHLSHS 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g01860 181 SMART PP2C_4 10 179 IPR001932 -
Gma05g01860 181 ProSitePatterns PPM-type phosphatase domain signature. 51 59 IPR000222 GO:0043169
Gma05g01860 181 Pfam Protein phosphatase 2C 23 165 IPR001932 -
Gma05g01860 181 ProSiteProfiles PPM-type phosphatase domain profile. 22 181 IPR001932 -
Gma05g01860 181 CDD PP2Cc 22 165 IPR001932 -
Gma05g01860 181 PANTHER PROTEIN PHOSPHATASE 2C-LIKE PROTEIN 17 165 - -
Gma05g01860 181 Gene3D - 17 169 IPR036457 -
Gma05g01860 181 PANTHER ALPHABET, ISOFORM E-RELATED 17 165 - -
Gma05g01860 181 SUPERFAMILY PP2C-like 20 167 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g01860 Gma-Chr5 40050698 40053091 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g01860 20 165 PP2C-type Phosphatase Gene Family AT2G29380 56.129 4.18e-57 181