Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g01830 ATGTCAACAACTTCCCATTCCATTGTTCACCACAGCTTATTCGAGGAGCAGGATCAGATGCCTACACAGATAGGTTTCTTTCCCTTTCCAACAAACCTTACTTTCCCTCCTTTGGGTTGCCATCAATCCTCTCTGAAAGCCTTCAGCTCCATAGCACCTTCTTCATCACTTGTTATATCTCAACAAGATTCTGTATCAAATCTAACAGCAGAAACCCTATTCTCAACCACTGCTCAAAAGTCAAGGGAAGACCTCACTTCTAGCTTTCGAGGAGCTCAATTCCTATCCTTGCATAGATTAAGTGTAAATCCATGGGCACTTGGAGAAGTGGCTGATTGCTTCAGCAGTAAAAGAACCACGAAGATGAAGAAAATCAAGGCAAGAAGGAAGGTGAGAGAGCCTAGGTTTTGCTTCAAGACCATGAGCGATATGGATGAATTGGACGATGGCTACAAGTGGAGGAAGTATGGACAGAAAGTTGTGAAGGGCACGCATCACCCTAGAAGCTATTACCGTTGCATACAAGATAATTGTCGTGTAAAGAAACGAGTGGAACGCTTCGCCGAGGATCCAAGGATGGTGATAACCACATATGAAGGGAGACATGTTCACTCTCCATCAAATGATCTCGAAGACTCCATCTCAACTTGA 651 0.4393 MSTTSHSIVHHSLFEEQDQMPTQIGFFPFPTNLTFPPLGCHQSSLKAFSSIAPSSSLVISQQDSVSNLTAETLFSTTAQKSREDLTSSFRGAQFLSLHRLSVNPWALGEVADCFSSKRTTKMKKIKARRKVREPRFCFKTMSDMDELDDGYKWRKYGQKVVKGTHHPRSYYRCIQDNCRVKKRVERFAEDPRMVITTYEGRHVHSPSNDLEDSIST 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g01830 216 PANTHER WRKY TRANSCRIPTION FACTOR 13-RELATED 46 213 - -
Gma05g01830 216 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 46 213 IPR044810 GO:0003700
Gma05g01830 216 SMART WRKY_cls 147 206 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma05g01830 216 Gene3D WRKY domain 132 207 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma05g01830 216 ProSiteProfiles WRKY domain profile. 142 207 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma05g01830 216 SUPERFAMILY WRKY DNA-binding domain 139 206 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma05g01830 216 Pfam WRKY DNA -binding domain 148 204 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g01830 Gma-Chr5 39827810 39829599 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g01830 119 216 WRKY Transcription Factor Family AT4G39410 79.798 2.00e-54 174
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gma05g01830 WRKY 8.3e-24 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g01830 05 39827810 39829599 Gma05g01830 05 39827810 39829599 ECH
Gma05g01830 05 39827810 39829599 Gma08g01319 08 11188047 11190252 GST