Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g01828 ATGTGGGCGTTTTGTATGATTTTGGTTCTGGCTCATTGCCAGCTACAAGGCGGTGAAGGAGCAGAGGCTGTATCTGGTATTGGTGTCAATTGGGGTGCAATAGCATCTCATCCTATGGATCCTCCCATTGTGGTGAATTTGCTAAAGGACAATGGAATTAAAAAGGTAAAGCTTTTTGATGCAGATTCTTGGACTGTGAGTGCTTTTTCTGGCACAGACATTGAAGTCATGGTTGGAATTCCCAATGATCAATTGAAGGAACTATCCAAAGACCAAGACAATGCAGAAGATTGGGTCAAACAAAATGTCAGCAAACATGTTCATGACGGAGGGGTCAACATCAGATATGTATCTGTTGGAAATGAGCCATTCTTGAAAAGTTACAATGGGTCATTTGTAGGAATCACATTTCCAGCAATGGAAAATGTTCAAAAGGCTATTGATAAGGCTGGTTTAGGAGACAAAATAAAGGTGACTACGGCTTTAAATGCTGATGTTTACGAGTCTAATTCAAACAAGCCCTCAGATGGTAATTTCCGCAAGGACATTTATGGTGTCATGAAACAAATAGTGAAGTTTCTTGATGAAAAGAAGTCACCGTTTCTTGTTAACATATATCCATTCCTTAGTCTATATCAAAATGAAGATTTTCCAGAGGATTATGCATTCTTTGAAGGTCATGGTAAAAGCACTGATGACAAAAATGCACATTACACCAACATGTTTGATGCTAACTTAGATACCCTTGTTTGGTCATTAAAAAAGATTGGTCATCCTAATGTGTCAATATGCGTAGGTGAAATTGGATGGCCAACTGATGGTGACAAAAATGCAAATGATAAAAATGCAAACAGGTTCTACCAAGGGTTCCTTAAGAAAATGGCAAGCAAGAAAGGGACTCCACTTCACCCTGGACCCGTGAACACTTATTTATTTTCTCTTTTTGATGAGAACATGAAGAGTGTTGCACCTGGTGACTTTGAGCGTCATTGGGGTATTTTTCGTTATGATGGGAAGCCTAAGTTCCCTATTGATTTTTCTGGCAAAGGAGAAGATAAAATGCCAATAGGAGCAAAAGGGGTTCGTTACCAAGAGCACAAATGGTGTGTCCTTAAAAATAATGCCAACAAGAGTGCGTTGGGTGGATCTTTAAGTTATGCTTGTGCAGGTGGTGATTGCACAAGCTTATGTCCTGGTTGTTCTTGTGGAAATTTGGATGCATCTGGTAATGCTTCATATGCTTTCAATCAATACTTTCAAATAAACGATCAAAGTGTTGAGGCATGTGATTTCGAGGGGTTGGCCACCATTGTATCAAAGGACCCATCAAAAGGAGATTGTTATTTCCCTATAGCTATCATCAGTAGTGGAAACATTCTCAGAGTAATGCAAAATGTGATAACTCGTTTCTGCACACTCCTGCTCTTCTATCCGCTACTCTCATCTCTTCACTTCCCTTCTATCACTCTTCTCACTTCTGAGAGGTGGAATCGTTGGGTCTTAATGGGTCCCTTTTCACTATCCGTTATGGTTAATGACTCTGCCATTTCATTACCAGATACTTGTACGAAAAGAAAGCAGAACTTACTTCTGAAAAATTCTTTTGCATCAGTTAGCATGGGAGATGAAAAGCCATTTGACTTCCTACGCATTTTATTTGAGGGCGTTATTGCAGGAGGTACAGCTGGAGTTGTTGTTGAAACAGCTTTATACCCAATCGACACAATAAAAACACGTCTGCAGgctgctcGCGGAGGAGAAAAACTAATATTGAAGGGCCTTTATTCCGGATTGGCAGGGAACCTTGTTGGTGTCTTACCGGCATCTGCTTTATTTGTTGGAGTTTATGAACCTATAAAGCAGAAATTGCTGAGGGTATTTCCTGAACACCTGAGTGCTTTTACTCACTTGATTGGTTGA 1920 0.3984 MWAFCMILVLAHCQLQGGEGAEAVSGIGVNWGAIASHPMDPPIVVNLLKDNGIKKVKLFDADSWTVSAFSGTDIEVMVGIPNDQLKELSKDQDNAEDWVKQNVSKHVHDGGVNIRYVSVGNEPFLKSYNGSFVGITFPAMENVQKAIDKAGLGDKIKVTTALNADVYESNSNKPSDGNFRKDIYGVMKQIVKFLDEKKSPFLVNIYPFLSLYQNEDFPEDYAFFEGHGKSTDDKNAHYTNMFDANLDTLVWSLKKIGHPNVSICVGEIGWPTDGDKNANDKNANRFYQGFLKKMASKKGTPLHPGPVNTYLFSLFDENMKSVAPGDFERHWGIFRYDGKPKFPIDFSGKGEDKMPIGAKGVRYQEHKWCVLKNNANKSALGGSLSYACAGGDCTSLCPGCSCGNLDASGNASYAFNQYFQINDQSVEACDFEGLATIVSKDPSKGDCYFPIAIISSGNILRVMQNVITRFCTLLLFYPLLSSLHFPSITLLTSERWNRWVLMGPFSLSVMVNDSAISLPDTCTKRKQNLLLKNSFASVSMGDEKPFDFLRILFEGVIAGGTAGVVVETALYPIDTIKTRLQAARGGEKLILKGLYSGLAGNLVGVLPASALFVGVYEPIKQKLLRVFPEHLSAFTHLIG 639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g01828 639 SUPERFAMILY (Trans)glycosidases 27 346 IPR017853 -
Gma05g01828 639 Pfam Mitochondrial carrier protein 553 624 IPR018108 -
Gma05g01828 639 Pfam Glycosyl hydrolases family 17 27 346 IPR000490 GO:0004553|GO:0005975
Gma05g01828 639 Gene3D - 363 455 - -
Gma05g01828 639 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 3 491 IPR044965 GO:0004553|GO:0005975
Gma05g01828 639 Gene3D Mitochondrial carrier domain 522 638 IPR023395 -
Gma05g01828 639 ProSiteProfiles Solute carrier (Solcar) repeat profile. 549 622 IPR018108 -
Gma05g01828 639 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE-LIKE PROTEIN 3 491 - -
Gma05g01828 639 Gene3D Glycosidases 26 353 - -
Gma05g01828 639 SMART X8_cls 367 449 IPR012946 -
Gma05g01828 639 SUPERFAMILY Mitochondrial carrier 555 630 IPR023395 -
Gma05g01828 639 Pfam X8 domain 367 436 IPR012946 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g01828 Gma-Chr5 39780285 39789033 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g01828 21 462 Miscellaneous Gene Families AT5G64790 54.853 0.0 520
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g01828 - - gmx:102667009 966.452
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g01828 05 39780285 39789033 Gma05g01828 05 39780285 39789033 ECH
Gma05g01828 05 39780285 39789033 Gma08g01317 08 11137882 11144386 GST