Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g01822 ATGGACTTCTACTTTGGAAACCCTCATCCTTATCCCAATATTCATCAATATCACGCTCATAATTCTGTAGTCAGCATGACTCCATCTTCCCCTGAGATCGCACTATCTGATTATCTCATGCTCGATGACTATGTTGATCATCAAGATTCTCGATCATCACAAAGCACTGAGTCATCAGAAAAAGCAACCTTCTGTGATCCCACTCACGGATTCAGCACTGGTGCAACCTCTAAGAACAATAACATGAAGTGCAAAAATGGGATTAATGAAAACAAAAGAGGAGTGGGTCCAAGGATCGCGTTCAGAACCAAATCAGAGCTTGAGATCATGGATGATGGATACAAGTGGAGGAAGTACGGCAAGAAGTCTGTGAAGAGCAATCCCAATCTAAGGAACTACTACAAATGTTCAAGTGGAGGATGCAGTGTGAAGAAAAGGGTGGAAAGGGATAGAGATGACTCCAGCTATGTGATAACAACTTATGAAGGTGTGCACAATCATGAGAGCCCATTTACCACATACTACAGCCCCATCTCCTTCGTACATTCTGATACTACTTTCAAATGA 567 0.4215 MDFYFGNPHPYPNIHQYHAHNSVVSMTPSSPEIALSDYLMLDDYVDHQDSRSSQSTESSEKATFCDPTHGFSTGATSKNNNMKCKNGINENKRGVGPRIAFRTKSELEIMDDGYKWRKYGKKSVKSNPNLRNYYKCSSGGCSVKKRVERDRDDSSYVITTYEGVHNHESPFTTYYSPISFVHSDTTFK 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g01822 188 SUPERFAMILY WRKY DNA-binding domain 102 170 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma05g01822 188 SMART WRKY_cls 110 169 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma05g01822 188 Gene3D WRKY domain 97 163 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma05g01822 188 PANTHER WRKY TRANSCRIPTION FACTOR 50-RELATED 12 175 - -
Gma05g01822 188 ProSiteProfiles WRKY domain profile. 105 170 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma05g01822 188 Pfam WRKY DNA -binding domain 111 168 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma05g01822 188 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 12 175 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g01822 Gma-Chr5 39737583 39740712 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g01822 95 178 WRKY Transcription Factor Family AT5G64810 72.619 2.76e-41 136
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gma05g01822 WRKY 2.6e-22 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g01822 - - gmx:100500248 395.201
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g01822 05 39737583 39740712 Gma05g01822 05 39737583 39740712 ECH
Gma05g01822 05 39737583 39740712 Gma08g01307 08 11088777 11092916 GST