Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g01818 ATGGCGCCGAAGATAACACGTAAGGTTAGCAGAAACCCTGAATTGATAAGGGGAATCGGAAAGTACTCGAGGTCGCAGATGTACCACAAGAGGGGCATTTGGGCTATCAAGGCCAAAAACGGTGGCGTTTTACCTCGCCACGACCCTAAACCCAAGCCTGAAGCTCCTGCTGAAAAACCACCCAAATTTTACCCTGCTGATGATATCAAGAAGCCCCTTGTCAACAAGCACAAACCGAAACCAGCTAAGCTCAGGGCTAGCATTACTCCCGGGACAGTGTTGATTCTTCTTGCCGGTAGATTTAAGGGAAAGAGGGTAGTCTTTTTGAAGCAGCTTCCTTCTGGGTTGCTTCTTGTGACTGGTCCTTTCAAGATTAATGGAGTTCCTTTGAGACGTGTCAATCAGTCGTATGTTATTGGCACATCAACCAAAGTAGATGTGTCTGCTGTTAATGTTGACCAGTTTGATGACAAATACTTTGCAAAGGAAGCCCAGAAGAAGAAGAAGAAGGGAGAGGGCGAGTTCTTTGAGGCAGAAAAGGAGGAAAAGAGTGTGTTGCCCCAGCAGAAGAAAGATGACCAGAAAACTGTTGACTCTGCATTGATAAAAGCCATCGGGAGTGTTCCAGATTTGAAGACATATCTGGGTGCTAGGTTTTCTTTAAAGGCTGGCGTGAAACCTCATGAGCTAGTTTTCTAG 699 0.4592 MAPKITRKVSRNPELIRGIGKYSRSQMYHKRGIWAIKAKNGGVLPRHDPKPKPEAPAEKPPKFYPADDIKKPLVNKHKPKPAKLRASITPGTVLILLAGRFKGKRVVFLKQLPSGLLLVTGPFKINGVPLRRVNQSYVIGTSTKVDVSAVNVDQFDDKYFAKEAQKKKKKGEGEFFEAEKEEKSVLPQQKKDDQKTVDSALIKAIGSVPDLKTYLGARFSLKAGVKPHELVF 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g01818 232 Gene3D - 86 170 IPR014722 -
Gma05g01818 232 PANTHER 60S RIBOSOMAL PROTEIN L6 1 232 - -
Gma05g01818 232 SUPERFAMILY Translation proteins SH3-like domain 86 172 IPR008991 -
Gma05g01818 232 PANTHER 60S RIBOSOMAL PROTEIN L6 1 232 IPR000915 GO:0003735|GO:0005840|GO:0006412
Gma05g01818 232 MobiDBLite consensus disorder prediction 39 81 - -
Gma05g01818 232 Pfam Ribosomal protein L6, N-terminal domain 7 60 IPR005568 GO:0003735|GO:0005840|GO:0006412
Gma05g01818 232 MobiDBLite consensus disorder prediction 43 75 - -
Gma05g01818 232 Coils Coil 161 181 - -
Gma05g01818 232 Pfam Ribosomal protein L6e 125 232 IPR000915 GO:0003735|GO:0005840|GO:0006412
Gma05g01818 232 CDD KOW_RPL6 80 232 IPR041997 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g01818 Gma-Chr5 39715349 39716975 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g01818 6 232 Cytoplasmic Ribosomal Protein Gene Family AT1G74060 81.938 4.97e-121 342
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g01818 05 39715349 39716975 Gma08g01303 08 11061691 11070234 GST