Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g01817 ATGGCGCCGAAGGTAACACGCAAGGTTAGCAGAAACCCCGAATTGATAAGGGGAATTGGAAAGTACTCGAGGTCGCAGATGTACCACAAGAGGGGCATTTGGGCTATCAAGGCCAAAAATGGTGGCGTTTTACCTCGCCACGACCCTAAACCCAAACCTGAAACACCCGCTGAAAAACCACCCAAATTTTACCCTGCTGATGATATCAAGAAGCCCCTTGTCAACAAGCACAAACCCAAACCCGCTAAGCTCAGGGCTAGCATTACTCCGGGAACAGTGTTGATTCTTCTTGCTGGTAGATTTAAGGGAAAGAGGGTAGTCTTTTTGAAGCAGCTTCCTTCTGGATTGCTTCTTGTAACTGGTCCTTTCAAGGTTAATGGAGTTCCTTTGAGACGTGTGAATCAGGCCTATGTTATTGGCACATCAACCAAAGTAGATATCTCTGCTGTTAATGTTGACAGCTTTGGCGACAAATACTTTGCGAAGGAAGCCCAGAAGAAGAAGAAGAAGGGAGAAGGCGAGTTCTTTGAGGCAGAGAAAGAGGAAAAGAGTGTGTTGCCCCAGCAGAAGAAAGATGACCAGAAAACTGTGGACGCTGCAGTGTTAAAAGCCATTGAGAGTGTGCCAGACTTGAAGTCCTATTTGGGTGCCAGGTTTTCTCTGAAGGCCGGGGTGAAACCACATGAGCTAGTCTTCTAG 699 0.4707 MAPKVTRKVSRNPELIRGIGKYSRSQMYHKRGIWAIKAKNGGVLPRHDPKPKPETPAEKPPKFYPADDIKKPLVNKHKPKPAKLRASITPGTVLILLAGRFKGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQAYVIGTSTKVDISAVNVDSFGDKYFAKEAQKKKKKGEGEFFEAEKEEKSVLPQQKKDDQKTVDAAVLKAIESVPDLKSYLGARFSLKAGVKPHELVF 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g01817 232 Pfam Ribosomal protein L6, N-terminal domain 6 60 IPR005568 GO:0003735|GO:0005840|GO:0006412
Gma05g01817 232 Gene3D - 86 170 IPR014722 -
Gma05g01817 232 PANTHER 60S RIBOSOMAL PROTEIN L6 1 232 - -
Gma05g01817 232 PANTHER 60S RIBOSOMAL PROTEIN L6 1 232 IPR000915 GO:0003735|GO:0005840|GO:0006412
Gma05g01817 232 MobiDBLite consensus disorder prediction 39 81 - -
Gma05g01817 232 MobiDBLite consensus disorder prediction 43 75 - -
Gma05g01817 232 Pfam Ribosomal protein L6e 125 232 IPR000915 GO:0003735|GO:0005840|GO:0006412
Gma05g01817 232 Coils Coil 161 181 - -
Gma05g01817 232 CDD KOW_RPL6 80 232 IPR041997 -
Gma05g01817 232 SUPERFAMILY Translation proteins SH3-like domain 86 172 IPR008991 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g01817 Gma-Chr5 39712514 39713971 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g01817 6 232 Cytoplasmic Ribosomal Protein Gene Family AT1G74060 81.057 8.49e-120 338