Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g01794 ATGGCCACCTCACTCGCTTGGAGACTCTCTGCCAACAATGGCACCACCCTTGCCGCAAATGATCTGGAAAGAAATGGTGACGGGAGGACTCAAGATTCAGAGCCCCCAACTCCACATTCTGTTATGAAAATGGGATTGAGAGAGCGTAACAGCAGCATGGAGGATCCAGATGGGACATTAGCTAGTGTTGCCCAATGCATTGAGCAGCTGCGTCAGAGCTCATCTTCTGTGCAGGAGAAAGAGTATTCCTTAAGGCAGTTATTGGAGCTTATAGATCTGCGTGAAAATGCTTTTGGTGCTGTTGGATCTCACTCTCAGGCAGTTCCAGTACTTGTTTCCCTTCTCCGGTCCGGTTCATTCAATGTGAAGATACAAGCAGCAACTGTCTTGGGTTCCCTTTGTAAAGAAAATGAGCTAAGGGTGAAGGTCTTGCTTGGAGGAAGCATTCCTCCATTGCTTGGTCTACTAAAGTCCAGTTCTACTGAAGGCCAAATTGCTGCTGCAAAGACTATTTATGCCGTCTCTCAGGGTGGTGTAAAAGATCATGTTGGTTCAAAAATTTTTTCGACTGAAGGAGTTGTACCAGTGCTCTGGGTGCAGCTGAAAACTGGCCTGAAGGCAGGAAATGTAGTTGAAGGTTTATTGACTGGTGCATTGAAAAATCTCTCCAGCAATACCGAGGGATTCTGGAATGCAACAATACAAGCTGGAGGAGTGGACATATTAGTGAAGTTACTGGCAATGGGACAGCCTAGCAGTTTAGCTAATGTGTGCAATTTACTTGCTTCTGTAATGATGGAGGATGCATCTGTTTGTTCAAAGGTGTTGACAGCGGAGGTGACAAAGCAACTTCTGAACCTATTAGGCCCAGGTAATGATGACTCTGTTAGAGCTGAAGCAGCTGGTGCTCTGAATTCTCTTTCTGCCCAGTGCAAAGAGGCACGGCGAGAGATAGCCAATGCTAATGGTATTCCTGCTTTGATCAATGCTACCATAGCTCCTTCCAAAGAATACATGCAGGGTGAGTGTGCTCAAGCATTACAGGAGAATGCTATGTGTGCTCTAGCAAACATCTCTGGGGGTTTGTCTTTTGTCATATCTAGCCTTGGTCAAAGTCTTGAATCATGCACCTCACCTACCCAAATTGCGGACACATTAGGAGCTTTGGCATCAGCTCTCATGATATATGATAACAAGGCAGAATCTACCAGAGCATCAGATCCTTTGGTTGTCGAGCAGACATTACTCAAGCAATTTAAACCTCGCTTGCCCTTCCTTGTACAGGAACGAACCATTGAAGCGCTTGCTAGTTTGTATGGAAATTCCATACTTTCAAATAAACTTGCAAATTCTGATGCAAAACATCTGCTTGTTGGTTTGATAACAATGGCCGCCAATGAAGTTCAAGACGAGCTTATAAAAGCTCTGTTGACACTGTGCAAAAGTGAAGGAAGTCTATGGCGTGCACTTCAGGGCCGTGAAGGGGTTCAGCTATTGATATCTCTTTTGGGGCTTTCATCAGAACAGCAGCAAGAGTGTGCAGTTGCCCTGCTTTGCCTTCTATCATATGAAAATGATGAAAGTAAATGGGCAATTACTGCTGCTGGTGGCATACCTCCACTTGTTCAAATTTTGGAGACAGGATCTGCAAAAGCAAAGGAAGATTCAGCTACAATCCTTAAGAACCTGTGCAATCATAGCGAAGATATACGTGCTTGCGTTGAAAGTGCTGATGCTGTTCCTGCATTGTTGTGGCTATTGAAGAATGGAAGCCCAAATGGGAAGGATATTGCAGCAAAGACTTTAAATCATTTAATACATAAATCTGATACTACAACCATTAGTCAGCTTACAGCGTTATTGACTAGTGATCTTCCTGATTCTAAGGTTTATGTCTTGGATGCTTTGAGAAGTATGCTTTCTGTTGCTCCCCTTAGTGAAATTTTACGTGAAGGTAGTGCTGCCAGTGATGCATTTGATACCATGATAATATTATTGAGCTCTACCAAAGAAGAAACTCAGGCAAAGTCTGCATCAGCTCTGGCAGGAATTTTTGAAACAAGGAAAGATGTGCGTGAAAGTAGCATTGCGGTTAAAATTCTTTTGTCAGCCATGAAATTGCTTAATGCTGAATCTGAAAGTATCCTGATTGAGTCCTCACACTGCCTGGCTGCAATATTTCTTTCCATCAAAGAGAACAGGGATGTAGCTGTTGTTGCCAGAGACACATTATCAACCCTAGTTGCACTAGCAAACTCTTCAGTTTTGGAAGTTGCAGAGATGGCCATGTGTGCTCTGGCAAACCTCATTTTGGACAGTGAGATTGCAGAGAAAGCTATTGCAGAAGAAGTTATCTTACCCGCTACTAGAATATTATGTGAAGGCACAATTTCTGGAAAAACCCATGCTGCAGCAGCAATTGCTCGTCTCCTGCATTCTCAGGATGTTGATTATGGTGTAACTGATTGTGTGAATCGTGCTGGAACTGTTCTTGCATTAGTTTCTTTCTTAGATTCTGCTGTTAATGGGTCTGTTGCCACATCAGAAGCTCTAGAAGCACTTGCCATCCTGTCAAGGTCAGAAGAGACCAGTGCAAATATTAAATCTGCTTGTGCAGTTTTGGCTGAATTCCCTAAAAGCATAAGCCCAATTGTCTTGTGCATTGTTGATTCAGAGCCAATGCTGCAGGATAAAACAATTGAGATTTTATCTCGATTATGTAAGGATCAGCCTGTTGTTTTAGGCGATACTATCGTGTCAGCACCTGGATGTATATCTTCAATAGCTAAAAGGATAATTAGTTCCACAAATGTAAAGGTCAAAATTGGGGGAGCAGCACTTCTTATTTGTACTGCAAAAGCCAATCATCAGAGACTGGTGGAGGATCTCAATTCATCAAACCTGTGTGCCAATCTTATTCGGTCTCTTGTTGATATGCTTACTTCTGCACAGCCTTCGTTGGGTTACCTGGATGGTGACAAGAAGGAATTCATTAGCATATGCAGGTACACAAGAGAAGAGGCCAACGGTTGTGAATCCAACACTAGCACCAGCATTATATGTGGTGCTGACTTGGCGATATGGTTACTGTCTATTCTTGCTTGTCATGGTGAAAAAAATAAAATTGCAATAATGGAGGCTGGAGCAATTGATGTTCTCATTGACAGGATCTCAAATTGTTTCTCACAATATTCTCAGATTGACTACAACGAAGATAGCAGCATGTGGATTCATGCTTTGTTGTTGGCAATATTATTTCAAAATAGAGATATCATACGGGCACATCCAACCATAAAATCTGTACCAGCACTTACCAGTTTATTGAAGTCAGAGGAATCAGCAAACAAATATTTTGCTGCACAATCAATAGCTAGCCTTGTCTGTAATGGTAGCAGGGGAACACTTTTGTCAGTGGCAAATTCTGGGGCAGCAGGTGGACTTATCTCTTTGCTTGGCTGTGCTGATACTGATATACAGGATCTTCTGGAATTATCAGAGGAATTTTCTTTGGTACGTTATCCTGATCAAGTGGCTCTTGAGAGGTTATTTAGAGTTGATGATATAAGAGGGGGAGCCACTTCTCGGAAGGCAATACCTGCCCTAGTTGATCTGCTCAAACCAATTCCAGATCGTCCAGGAGCACCATTTTTGGCACTTGGGCTTTTGACTCAGCTTGGTAAAGATTGTCCTTCAAATATGAGTGTAATGGTGGAGTCTGGGGCCTTAGAGGCACTTACGAAGTATCTTTCACTGAGTCCACAAGATGCAACTGAAGAAGCTGCTACAGATCTGCTAGGAATTCTGTTTAGCAGTGCTGAAATACGAAAACATGAATCAGCATATGGTGCTGTTGCTCAACTTGTAGCTGTTCTACGTTTAGGGGGAAGAGGTGCAAGGTATAGTGCTGCAAAAGCCTTGGAAAGTTTGTTTTCTGCTGACCACATTAGAAATGCAGAGATTGCTCGGCAAGCTGTTCAACCGTTGGTGGAGATTCTCAGTACAGGTTCAGAAAAGGAGCAGCATGCTGCCATTGCTGCATTGGTTGGGTTACTGAGTGAAAATCCATCAAGAGCACTTGCTGTTGCTGATGTTGAGATGAATGCAGTGGAAGTTCTTTGTAGGATCATTTCATCAAATTGTTCAATGGACTTGAAAGGGGATGCTGCCGAATTATGTTGTGCTCTTTTTGGAAATACTAGGATTCGGTCCACAGCAGCTGCTGCATGCTGTGTTGAACCACTTGTCTCTCTCCTTGTAACTGAGCTCAGTCCTGCTCAGCTTTCAGTTGTCCGGGCATTGGATAGGCTTGTTGATGATGAGCAATTGGCTGAATTAGTTGCTGCACATGGTGCAGTTGTTCCTCTTGTTGGTCTACTGTCTGGTAGGAACTATATACTTCATGAGGCTATTTCCAGGGCTCTGGTCAAGTTAGGAAAAGACAGGCCTGCATGTAAAATGGAAATGGTGAAAGCTGGAGTTATTGAAAGCGTACTTGACATCTTACATGAAGCACCTGATTATCTATGTGCAGCTTTTGCTGAATTGTTGCGTATATTGACCAATAATGCTAGCATAGCTAAAGGATCATCTGCTGCTAAAGTGGTTGAACCATTGTTTTTGTTGTTGACAAGACAGGAATTTGGGCCTGATGGACAGCACAGTGCATTGCAGGTTTTGGTTAATATCTTAGAACATCCACAGTGCCGCGCTGACCATTCATTGACTTCTCGCCAAGTTATTGAACCACTTATCCATTTGCTTGATTCTCCAATTTCAGCAGTACAACAGTTGGCTGCTGAGCTTCTTTCACATCTACTTGTAGAAGAGCGCcttcagaaggatccagtgacacagcaagcaatTGGCCCTCTCATTCGAGTTCTTGGTTCTGGTATACACATATTGCAGCAGAGAGCTGTAAAAGccctagttagtattgcactaacatggcctaatgaaattgctaaagagggtggtgttattgaaatttccaaagttatattgcAAGCTGACCCTTCCCTTCCTCATGCTTTATGGGAATCTGCTGCCTCGGTTTTGTCAAGTATTCTGCAGTTTAGCTCTGAATTCTACTTGGAAGTTCCTATTGCTGTACTGGTAAGGTTGCTTCGATCAGGCTCAGAGAGCACAGTTGTTGGTGCTTTAAATGCTCTTTTAGTGTTGGAAAATGATGACGGAACTAGTGCAGAAGCTATGGCTGAAAGTGGTGCTATAGAGGCTCTCTTGGAGCTCCTACGATCTCATCAGTGTGAGGAAACTGCTGCAAGACTTTTAGAAGTATTGCTGAACAATGTGAAGATTCGAGAAACGAAAGTAACAAAATCAGCTATCGTACCATTATCCCAGTATCTTTTGGACCCACAAACTCAAGCACAGCAGGCAAGGTTGTTGGCAACTTTGGCTCTTGGGGATCTGTTTCAGAATGAGGCTCTTGCTCGAACAAGTGATGCAGTTTCAGCTTGTCGTGCTTTAGTGAATGTGCTTGAAGAGCAACCAACAGAAGAAATGAAAGTCGTAGCCATATGTGCTTTGCAGAATCTTGTGATGTACAGTCGATCAAATAGGAGAGCAGTTGCAGAGGCTGGTGGTGTTCAGGTTGTATTGGATCTGATAGGTTCAAGTGATCCAGAAACATCAATTCAGGCGGCAATGTTTGTTAAACTTCTCTTCTCAAATAATACTATTCAAGAGTATGCTTCTAGTGAAACAGTCAGAGCAATTACTGCTGCTATTGAGAAAGATTTATGGGCTTCTGGAACTGTGAATGATGAGTATCTGAAAGCCTTAAATTCTCTATTTACCAACTTCCCAAGACTTAGAGCAACTGAACCAGCAACGCTTAGCATTCCCCATCTGGTTACAGCCTTAAAGACAGGTTCAGAGGCTTGTCAGGAAGCTGCATTGGATGCACTTTTCCTGCTCAGACAAGCTTGGTCAGCATGCCCAGTTGAAGTTTCTAGAGCTCAGTCAATTGCAGCTGCAGATGCTATTCCATTGCTGCAGTACTTAATCCAGTCTGGGCCGCCTCGGTTTCAGGAGAAAGCAGAATTTTTATTGCAGTGTTTACCAGGGACATTGGTGGTGATCATCAAGCGTGGTAACAATATGAAACAGTCTGTTGGAAACCCTAGTGTTTACTGCAAGCTTACACTTGGCAACACTCCACCAAGGCAAACCCAGGTGGTTTCAACTGGCCCTAATCCAGAATGGGGTGAGAGCTTTTCATGGACCTTTGAGAGTCCTCCAAAAGGCCAGAAGCTTCATATTTCTTGCAAAAATAAGAGCAAAGTGGGAAAGAGTAAATTTGGGAAAGTTACAATCCAGATTGATCGAGTGGTAATGCTTGGATCAGTAGCTGGAGAGTATGCTTTGTTGCCTCAAAGTAAAAGTGGCCCCCCGCGGAATCTAGAAATAGAATTTCAGTGGTCTAACAAATGA 6456 0.4244 MATSLAWRLSANNGTTLAANDLERNGDGRTQDSEPPTPHSVMKMGLRERNSSMEDPDGTLASVAQCIEQLRQSSSSVQEKEYSLRQLLELIDLRENAFGAVGSHSQAVPVLVSLLRSGSFNVKIQAATVLGSLCKENELRVKVLLGGSIPPLLGLLKSSSTEGQIAAAKTIYAVSQGGVKDHVGSKIFSTEGVVPVLWVQLKTGLKAGNVVEGLLTGALKNLSSNTEGFWNATIQAGGVDILVKLLAMGQPSSLANVCNLLASVMMEDASVCSKVLTAEVTKQLLNLLGPGNDDSVRAEAAGALNSLSAQCKEARREIANANGIPALINATIAPSKEYMQGECAQALQENAMCALANISGGLSFVISSLGQSLESCTSPTQIADTLGALASALMIYDNKAESTRASDPLVVEQTLLKQFKPRLPFLVQERTIEALASLYGNSILSNKLANSDAKHLLVGLITMAANEVQDELIKALLTLCKSEGSLWRALQGREGVQLLISLLGLSSEQQQECAVALLCLLSYENDESKWAITAAGGIPPLVQILETGSAKAKEDSATILKNLCNHSEDIRACVESADAVPALLWLLKNGSPNGKDIAAKTLNHLIHKSDTTTISQLTALLTSDLPDSKVYVLDALRSMLSVAPLSEILREGSAASDAFDTMIILLSSTKEETQAKSASALAGIFETRKDVRESSIAVKILLSAMKLLNAESESILIESSHCLAAIFLSIKENRDVAVVARDTLSTLVALANSSVLEVAEMAMCALANLILDSEIAEKAIAEEVILPATRILCEGTISGKTHAAAAIARLLHSQDVDYGVTDCVNRAGTVLALVSFLDSAVNGSVATSEALEALAILSRSEETSANIKSACAVLAEFPKSISPIVLCIVDSEPMLQDKTIEILSRLCKDQPVVLGDTIVSAPGCISSIAKRIISSTNVKVKIGGAALLICTAKANHQRLVEDLNSSNLCANLIRSLVDMLTSAQPSLGYLDGDKKEFISICRYTREEANGCESNTSTSIICGADLAIWLLSILACHGEKNKIAIMEAGAIDVLIDRISNCFSQYSQIDYNEDSSMWIHALLLAILFQNRDIIRAHPTIKSVPALTSLLKSEESANKYFAAQSIASLVCNGSRGTLLSVANSGAAGGLISLLGCADTDIQDLLELSEEFSLVRYPDQVALERLFRVDDIRGGATSRKAIPALVDLLKPIPDRPGAPFLALGLLTQLGKDCPSNMSVMVESGALEALTKYLSLSPQDATEEAATDLLGILFSSAEIRKHESAYGAVAQLVAVLRLGGRGARYSAAKALESLFSADHIRNAEIARQAVQPLVEILSTGSEKEQHAAIAALVGLLSENPSRALAVADVEMNAVEVLCRIISSNCSMDLKGDAAELCCALFGNTRIRSTAAAACCVEPLVSLLVTELSPAQLSVVRALDRLVDDEQLAELVAAHGAVVPLVGLLSGRNYILHEAISRALVKLGKDRPACKMEMVKAGVIESVLDILHEAPDYLCAAFAELLRILTNNASIAKGSSAAKVVEPLFLLLTRQEFGPDGQHSALQVLVNILEHPQCRADHSLTSRQVIEPLIHLLDSPISAVQQLAAELLSHLLVEERLQKDPVTQQAIGPLIRVLGSGIHILQQRAVKALVSIALTWPNEIAKEGGVIEISKVILQADPSLPHALWESAASVLSSILQFSSEFYLEVPIAVLVRLLRSGSESTVVGALNALLVLENDDGTSAEAMAESGAIEALLELLRSHQCEETAARLLEVLLNNVKIRETKVTKSAIVPLSQYLLDPQTQAQQARLLATLALGDLFQNEALARTSDAVSACRALVNVLEEQPTEEMKVVAICALQNLVMYSRSNRRAVAEAGGVQVVLDLIGSSDPETSIQAAMFVKLLFSNNTIQEYASSETVRAITAAIEKDLWASGTVNDEYLKALNSLFTNFPRLRATEPATLSIPHLVTALKTGSEACQEAALDALFLLRQAWSACPVEVSRAQSIAAADAIPLLQYLIQSGPPRFQEKAEFLLQCLPGTLVVIIKRGNNMKQSVGNPSVYCKLTLGNTPPRQTQVVSTGPNPEWGESFSWTFESPPKGQKLHISCKNKSKVGKSKFGKVTIQIDRVVMLGSVAGEYALLPQSKSGPPRNLEIEFQWSNK 2151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g01794 2151 Gene3D - 1652 2028 IPR011989 -
Gma05g01794 2151 SMART arm_5 1229 1270 IPR000225 GO:0005515
Gma05g01794 2151 SMART arm_5 1398 1438 IPR000225 GO:0005515
Gma05g01794 2151 SMART arm_5 525 565 IPR000225 GO:0005515
Gma05g01794 2151 SMART arm_5 136 176 IPR000225 GO:0005515
Gma05g01794 2151 SMART arm_5 1312 1352 IPR000225 GO:0005515
Gma05g01794 2151 SMART arm_5 268 309 IPR000225 GO:0005515
Gma05g01794 2151 SMART arm_5 1481 1521 IPR000225 GO:0005515
Gma05g01794 2151 SMART arm_5 482 523 IPR000225 GO:0005515
Gma05g01794 2151 SMART arm_5 1730 1769 IPR000225 GO:0005515
Gma05g01794 2151 SMART arm_5 567 607 IPR000225 GO:0005515
Gma05g01794 2151 SMART arm_5 311 360 IPR000225 GO:0005515
Gma05g01794 2151 SMART arm_5 817 859 IPR000225 GO:0005515
Gma05g01794 2151 SMART arm_5 1569 1607 IPR000225 GO:0005515
Gma05g01794 2151 SMART arm_5 94 135 IPR000225 GO:0005515
Gma05g01794 2151 SMART arm_5 1184 1227 IPR000225 GO:0005515
Gma05g01794 2151 SMART arm_5 731 771 IPR000225 GO:0005515
Gma05g01794 2151 SMART arm_5 1857 1897 IPR000225 GO:0005515
Gma05g01794 2151 SMART arm_5 1439 1479 IPR000225 GO:0005515
Gma05g01794 2151 SUPERFAMILY ARM repeat 1580 2025 IPR016024 -
Gma05g01794 2151 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 2030 2133 IPR035892 -
Gma05g01794 2151 SUPERFAMILY ARM repeat 661 1063 IPR016024 -
Gma05g01794 2151 SUPERFAMILY ARM repeat 1398 1657 IPR016024 -
Gma05g01794 2151 SMART C2_3c 2031 2127 IPR000008 -
Gma05g01794 2151 Gene3D - 653 875 IPR011989 -
Gma05g01794 2151 PANTHER PROTEIN CELLULOSE SYNTHASE INTERACTIVE 1 19 2151 IPR044297 GO:0008017|GO:0010330|GO:0051211|GO:2001006
Gma05g01794 2151 Coils Coil 297 324 - -
Gma05g01794 2151 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 536 578 IPR000225 GO:0005515
Gma05g01794 2151 CDD C2 2032 2122 - -
Gma05g01794 2151 Gene3D - 414 652 IPR011989 -
Gma05g01794 2151 Gene3D - 48 413 IPR011989 -
Gma05g01794 2151 Gene3D - 1367 1647 IPR011989 -
Gma05g01794 2151 Gene3D C2 domain 2029 2151 IPR035892 -
Gma05g01794 2151 PANTHER CELLULOSE SYNTHASE-INTERACTIVE PROTEIN 19 2151 - -
Gma05g01794 2151 SUPERFAMILY ARM repeat 55 643 IPR016024 -
Gma05g01794 2151 Pfam Armadillo/beta-catenin-like repeat 104 134 IPR000225 GO:0005515
Gma05g01794 2151 Pfam Armadillo/beta-catenin-like repeat 525 564 IPR000225 GO:0005515
Gma05g01794 2151 Pfam C2 domain 2030 2119 IPR000008 -
Gma05g01794 2151 Gene3D - 876 1366 IPR011989 -
Gma05g01794 2151 ProSiteProfiles C2 domain profile. 2011 2128 IPR000008 -
Gma05g01794 2151 MobiDBLite consensus disorder prediction 18 42 - -
Gma05g01794 2151 SUPERFAMILY ARM repeat 1082 1436 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g01794 Gma-Chr5 39543711 39554422 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g01794 496 620 U-box Gene Family AT3G46510 32.540 3.17e-07 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g01794 - - gmx:100807370 4036.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g01794 05 39543711 39554422 Gma05g01794 05 39543711 39554422 ECH
Gma05g01794 05 39543711 39554422 Gma08g01285 08 10895072 10905453 GST
Gma05g01794 05 39543711 39554422 Gma18g00179 18 1466211 1480318 PCT
Gma05g01794 05 39543711 39554422 Gma11g02396 11 39335823 39345963 PCT