Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g01778 ATGACGCAGAATGCGATAGTGTCCAAGACAAAATCGGGGATCAACCGGGACATAACCGTGCCACAAAAGCCACTGGCGGCGGCGGCGGCGGCGGGGGGGTACATTCCCATTCCGAGGAGGAGGGTTTTGAAGAACCTGGAAATCAATGCATGGGTTGATTCCATGAGATCCTCTTCTCCAACCAATTCCAAATCCACCTCTTCTCTCGCAGAAGAACACAGCACTTGGATTCTTCGCCACCCCTCAGCATTAGACATGTTCGAGCAAATTATGGATGCGTCCCGGGGAAAGCAAATTGTCATGTTTCTCGACTATGATGGTACTTTGTCGCCTATTGTTGATGACCCAGACCGTGCTTTCATGTCGGATTCGATGAGGAGAACGGTGAGGAAACTTGCAAGGTGTTTTCCTACTGCTATAGTTACCGGCAGATGCAAAGACAAGGTTTACAATTTTGTTCGCTTGGCTGAGCTATATTATGCTGGAAGCCATGGCATGGATATTCAAGGGCCAACAAGAACCTCCAAATACAGCAACAAAGATAAAGGAGAGCCTGTTCTTTTTCAACCTGCTAGTGAATTTCTTCCCATGATTGATGAGGTGTACCATCAATTAGTTGAGAAAATGAAATCAATTCCTGGAGCCATGGTGGAGAACAACAAGTTCTGCTGTTCTGTTCATTTTCGCTGCGTTGATGAAAAGAAATGGAGTGAACTGGCACAGGAAGTGAGATCAGTATTAAAAGAGTACCCGAAGCTTCGTCTTAACCAAGGAAGGAAGGTATTAGAGATTCGTCCATCTATTAAATGGGACAAAGGGAAGGCGCTGGAATTTTTGTTAGAGTCACTTGGATTTGCCAACTGTAACGATGTCTTTCCTGTTTACATTGGAGATGATAAAACCGATGAAGATGCATTCAAGAAATTAAGAGACAGAGGACAAGGTTTTGGGATTCTTGTCTCGAAATTTCCAAAGGACACTACTGCATCATACTCTTTACAAGAACCAAACGAGGTGATGGATTTCCTTCAACGTTTGGTGGAGTGGAAACAAGTATCCCTCCGACTCAGAACACGTTCTCGGGTGTAA 1089 0.449 MTQNAIVSKTKSGINRDITVPQKPLAAAAAAGGYIPIPRRRVLKNLEINAWVDSMRSSSPTNSKSTSSLAEEHSTWILRHPSALDMFEQIMDASRGKQIVMFLDYDGTLSPIVDDPDRAFMSDSMRRTVRKLARCFPTAIVTGRCKDKVYNFVRLAELYYAGSHGMDIQGPTRTSKYSNKDKGEPVLFQPASEFLPMIDEVYHQLVEKMKSIPGAMVENNKFCCSVHFRCVDEKKWSELAQEVRSVLKEYPKLRLNQGRKVLEIRPSIKWDKGKALEFLLESLGFANCNDVFPVYIGDDKTDEDAFKKLRDRGQGFGILVSKFPKDTTASYSLQEPNEVMDFLQRLVEWKQVSLRLRTRSRV 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g01778 362 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 101 312 IPR006379 -
Gma05g01778 362 Pfam Trehalose-phosphatase 102 336 IPR003337 GO:0003824|GO:0005992
Gma05g01778 362 PANTHER TREHALOSE-PHOSPHATE PHOSPHATASE C-RELATED 27 355 - -
Gma05g01778 362 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 27 355 IPR044651 GO:0004805|GO:0005992
Gma05g01778 362 Gene3D - 99 187 IPR023214 -
Gma05g01778 362 Gene3D - 199 359 IPR023214 -
Gma05g01778 362 TIGRFAM T6PP: trehalose-phosphatase 97 347 IPR003337 GO:0003824|GO:0005992
Gma05g01778 362 CDD HAD_TPP 100 340 - -
Gma05g01778 362 SUPERFAMILY HAD-like 100 349 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g01778 Gma-Chr5 39362921 39365831 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g01778 90 353 Trehalose Biosynthesis Gene Families AT1G06410 24.911 2.41e-07 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g01778 K01087 - gmx:100803119 713.375