Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g01745 ATGCTTGCAAGCTTAACCATGGAACGGTATGAGATAATTAAAGATATTGGGTCAGGGAACTTTGGTGTGGCAAAGCTGGTCAAGGAAAAATGGAGTGGTGAATTGTATGCTATCAAGTTCATTGAGAGAGGCTTCAAGATTGATGAACACGTGCAAAGAGAGATTATAAATCATAGGTCCTTGAAGCATCCCAATATCATTAGATTTAAAGAGGCGAGATATTTCTTTCAGCAACTGATTTCTGGAGTCAGCTATTGCCATTCAATGGAAATTTGCCATAGAGATCTTAAGCTGGAAAACACACTTCTAGATGGAAGCTCAGCACCACGACTTAAAATCTGTGACTTCGGTTACTCAAAGtcatctgttttgcactcccagccaaaatctactgtaggaacccctgcctatattgcaccagaggttttgtcaagaagagaatatgatggcaaggtcgcggatgtttggtcttgtggggtgaccttatatgtgatgttggttggagcatatccttttgaagacccagaagacccaagaaacttcagaaaaacacttcagCGAATTCTTAGTGTCCACTATTCTATTCCTGACTATGTACGTATCAGTAAAGAGTGTAGGTACCTTTTGTCTCGAATATTTGTGGCCAACCCGGAAAAGAGAATTACCATACCGGAGATTAAAATGCACCCTTGGTTCCTCAAGAATTTGCCACTAGAATTTATGGACGAGAGTGAAGGGGTGTTGCAAAATGATGATGTGAATGACGACTCATCTGAGACTCAAAGCATTGAAGAAATACTGTCCATAATTCAAGAGGCTAGGAAACCGAGTGAGGGCCCAAAAGTTAGTGAGCAATTTGTTGGGGGCAGCATGGACCTTGATGATATTGATGCGGATGCTGACATTGATGACATTGAGACAAGCGGTGATTTTGTCTGTGCATTGTGA 948 0.3238 MLASLTMERYEIIKDIGSGNFGVAKLVKEKWSGELYAIKFIERGFKIDEHVQREIINHRSLKHPNIIRFKEARYFFQQLISGVSYCHSMEICHRDLKLENTLLDGSSAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRREYDGKVADVWSCGVTLYVMLVGAYPFEDPEDPRNFRKTLQRILSVHYSIPDYVRISKECRYLLSRIFVANPEKRITIPEIKMHPWFLKNLPLEFMDESEGVLQNDDVNDDSSETQSIEEILSIIQEARKPSEGPKVSEQFVGGSMDLDDIDADADIDDIETSGDFVCAL 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g01745 315 ProSiteProfiles Protein kinase domain profile. 10 232 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma05g01745 315 ProSitePatterns Protein kinases ATP-binding region signature. 16 39 IPR017441 GO:0005524
Gma05g01745 315 SMART serkin_6 10 232 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma05g01745 315 ProSitePatterns Serine/Threonine protein kinases active-site signature. 91 103 IPR008271 GO:0004672|GO:0006468
Gma05g01745 315 Gene3D Phosphorylase Kinase; domain 1 3 73 - -
Gma05g01745 315 Pfam Protein kinase domain 71 232 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma05g01745 315 PANTHER SERINE/THREONINE KINASE 71 309 - -
Gma05g01745 315 PANTHER SERINE/THREONINE KINASE 8 71 - -
Gma05g01745 315 Gene3D Transferase(Phosphotransferase) domain 1 74 285 - -
Gma05g01745 315 SUPERFAMILY Protein kinase-like (PK-like) 6 245 IPR011009 -
Gma05g01745 315 PANTHER SERINE/THREONINE-PROTEIN KINASE SAPK1 8 71 - -
Gma05g01745 315 PANTHER SERINE/THREONINE-PROTEIN KINASE SAPK1 71 309 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g01745 Gma-Chr5 39110488 39113348 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g01745 9 250 CBL-interacting serine-threonine protein kinases AT5G25110 38.062 1.03e-50 173
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Gma05g01745 Pkinase 2.4e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g01745 K14498 - gmx:100788662 611.298
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g01745 05 39110488 39113348 Gma08g01232 08 10483607 10486782 GST