Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g01738 ATGGGAAGAACCAAAGTCTCCACCCTCTTTGCCAATAAGCACAACAACAACAATTACATGCTTCCTTATTCCAACACCATAAGACAAACTCTTGTAAACAGGCCAAATACCCACAAAGACCGGTTCCCCTTTTCACTCTTTGAATTATTGCGGCGCCTTATTCATTCAAGTATTCCTTACGACATCTTCTTCCATTTTCATTCACACTTCTCTCTAACTAGAAAAGTAGATGGAGACTCAAAAACCGAGGAAGAGGAGAAAGTCTACTCTTGGTTATACACCTTGGCCCAGTCAGACAAAAACTTGGTTTTCGAGTACGTTAGGTCCACTGAGAGAGGCAATATTTTTCAATTCTGTGCAGGCTTAAGTTTCACAGAAGCCGATAGGAGACTGAGGGAAAATGGGCCAAATGTTCCACTTGAGTATTCCTTTCCAAGATGGTGGCATCTTCTATGGAACTCTCTTTTCCATCCTTTCATTATCATTCTGATTGTTTTGTCAGTTCTGTCATTCATTACCTGCGACAGTCCAAATGGATTTATCATGCTCATATTGGTTTTCATCAGTGTCACCCTTCGTTTCTATCAGGAATACAGCAGCTCAAAAGCAGCAATGAAGCTTTCAGAATTTGTAAAATGTCCAATAAAAGTTCAAAGATGCGCTGGTAGAGTTGTTCAGAAAGAACTTGTAGTTCAAGTTGATCAGAGGGATGTAGTTCCAGGTGACATTGTGATTTTTGAACCTGGTGACCTCTTTCCTGGAGATATCAGGTTGTTATCTTCTAAACAACTTGTTGTAAGCCAGGCATCACTAACTGGGGAATCTTGGACAACTGACAAAACTGCTGAAATCAGAGAAGATCACAGCACTCCTTTATTGGATTTAAAGAACATCTGCTTTATGGGCACAAACGTGGTATCTGGTACTGGAACAGGCTTAGTGATTTCCACAGGATCCAATACTTACATGAGCACCATGTTTTCAAAAGTTGGGAAGAAGAAACCACCAGATGAATTTGAAAAGGGTCTCAGACGGATATTTTACTTGCTTATTTCTGTCATTCTAGCAGTTGTTACCATCATGTTTGTGATAAATTACACTACATCTCTTAATTTGAGCCAGAGTGTTCTTTTTGCCATCTCAGTTGCATCTGCCCTCAATCCTCAGATGCTTCCCCTCATCATTAACACATGTCTTGCAAAAGGAGCACTTGCTATGGCTAAAGACAGATGTATAGTAAAAAGTTTAACATCTATACGCCACATGGGATCAATGGATATTCTTTGTATTGATAAGACAGGCTCCCTTACAATGAATCATGCAATCATGGTTAATCATCTTGACTGCAGGGGTTTACCCCAAGAAAAAATTTTACGCTATGCCTTCCTCAACTCTTACTTTAAGAGTGACCAGAAGTATCCTCTGGATGATGCTATCCTAGCATTTGTATATTCAAATGGATTCAGGTTTCAGCCATCTAAGTGGAGGAAGATAGATGAGATTCCTTTTGACTTCATAAGAAGAAGAGTATCTGTCATCTTAGAAACAGAAGGCGGACACTCACAATTCTTTGGCAGGTTCCTGTTAACAAAAGGAGCACTGTTAGAAGTATTGAGAGTTTGTTCTTTCATTGAGAATTTCGATAAAGATGAAATTTCTCCCTTCTCTTCAAATGATTATCAGCGGATTTTAAATCTCTCAGAAGATTTGAGCAATGAGGGGTTAAGGGTAATAGCAGTAGCTATAAGGAAGCTGGAAATGCCCCAAATATGCGAAACAAGTAATGGAAGCAAGAGAGAAGAGGAGGATATTGAAAGAGACATGGTGTTCATCGGCCTCATAACGTTTTTCGACCCACCAAAGGACTCAGCAAAGCAAGCACTGTGGCGTTTGTCCGAGAAGGGAGTGAAGGCTAAGGTTTTAACTGGTGACTCCCTCTCCTTGACAACAAGGGTATGCAGGGAAGTTGGCATAAGTACCACTCATGTAATAACAGGTCCTGAACTAGAACAACTTGACCAAAACACTTTCCATGAGACAGTTCAAAGAGCCACAGTACTCGCTCGTCTCACCCCAATTCAGAAACAACGAGTGGTGCAATCCTTGCAAACAATTGGAAACCATGTCGTTGGGTTCTTAGGAGATGGAGTGAATGATTCACTAGCTTTAGATGCTGCCAATGTAAGCATTTCTGTGGACTCAGGTGTAGCCATTGCCAAAGACATGGCTGATATTATCTTACTTGAGAAAGACCTCAACGTGCTTGTTGCAGGAGTGGAGCATGGTAGACTTAGTTTTGGCAACACAATGAAGTATCTTAAGATGTCAGTGATAGCTAACTTGGGAAGTGTCATTTCACTCCTCATAGCAACACTGTTATTCAAGTATGAGCCCTTAACTTCTAGACAGCTTCTTACTCAGAATTTCATCTACAGTGTGGGACAGATTGCCCTTGCTTGGGACAAGATGGATGAAGAGTATGTTAAGACACCTCACAAGTCCTCAGAGAGAGGCTTGTCCATGTTCATGTTGTGGAATGCACCAGTGTGCACCCTTTGTGATGTGGCAACACTTTTGTTTCTTTGGTTTTATTACAAGGCTTACACTGATGTGACTCAGAAGTTTTTCCATTCAGCTTGGTTCATTGAAGGTCTCCTATTGCAGACCCTCATCATCCACTTGATAAGGACAGAGAAAATCCCTTTCATACAGGATGTTGCATCTTGGCCTGTGATTTTCTCCACTGTTGTGACATCTGCAATTGGAATTGCACTTCCATTCACACCCATTGGGAAGGTCATGGGATTCTCACTTATACCTCTTTCATATTTCGGATTTTTGGTGCTTCTTTTTCTGGGGTATTTTACAGTTGGCCAGGTCGTTAAGAGACTTTACATATTGGTTTATAAGAAATGGCTTTGA 2922 0.4086 MGRTKVSTLFANKHNNNNYMLPYSNTIRQTLVNRPNTHKDRFPFSLFELLRRLIHSSIPYDIFFHFHSHFSLTRKVDGDSKTEEEEKVYSWLYTLAQSDKNLVFEYVRSTERGNIFQFCAGLSFTEADRRLRENGPNVPLEYSFPRWWHLLWNSLFHPFIIILIVLSVLSFITCDSPNGFIMLILVFISVTLRFYQEYSSSKAAMKLSEFVKCPIKVQRCAGRVVQKELVVQVDQRDVVPGDIVIFEPGDLFPGDIRLLSSKQLVVSQASLTGESWTTDKTAEIREDHSTPLLDLKNICFMGTNVVSGTGTGLVISTGSNTYMSTMFSKVGKKKPPDEFEKGLRRIFYLLISVILAVVTIMFVINYTTSLNLSQSVLFAISVASALNPQMLPLIINTCLAKGALAMAKDRCIVKSLTSIRHMGSMDILCIDKTGSLTMNHAIMVNHLDCRGLPQEKILRYAFLNSYFKSDQKYPLDDAILAFVYSNGFRFQPSKWRKIDEIPFDFIRRRVSVILETEGGHSQFFGRFLLTKGALLEVLRVCSFIENFDKDEISPFSSNDYQRILNLSEDLSNEGLRVIAVAIRKLEMPQICETSNGSKREEEDIERDMVFIGLITFFDPPKDSAKQALWRLSEKGVKAKVLTGDSLSLTTRVCREVGISTTHVITGPELEQLDQNTFHETVQRATVLARLTPIQKQRVVQSLQTIGNHVVGFLGDGVNDSLALDAANVSISVDSGVAIAKDMADIILLEKDLNVLVAGVEHGRLSFGNTMKYLKMSVIANLGSVISLLIATLLFKYEPLTSRQLLTQNFIYSVGQIALAWDKMDEEYVKTPHKSSERGLSMFMLWNAPVCTLCDVATLLFLWFYYKAYTDVTQKFFHSAWFIEGLLLQTLIIHLIRTEKIPFIQDVASWPVIFSTVVTSAIGIALPFTPIGKVMGFSLIPLSYFGFLVLLFLGYFTVGQVVKRLYILVYKKWL 973
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g01738 973 Pfam haloacid dehalogenase-like hydrolase 565 727 - -
Gma05g01738 973 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 422 620 IPR023299 GO:0000166
Gma05g01738 973 Gene3D - 213 317 - -
Gma05g01738 973 Gene3D - 178 925 - -
Gma05g01738 973 Pfam Cation transporter/ATPase, N-terminus 121 170 IPR004014 -
Gma05g01738 973 PANTHER CATION TRANSPORTING ATPASE 73 972 - -
Gma05g01738 973 SMART Cation_ATPase_N_a_2 94 175 IPR004014 -
Gma05g01738 973 PRINTS Magnesium-transporting ATPase signature 771 786 IPR006415 GO:0015444|GO:0015693|GO:0016021
Gma05g01738 973 PRINTS Magnesium-transporting ATPase signature 463 476 IPR006415 GO:0015444|GO:0015693|GO:0016021
Gma05g01738 973 PRINTS Magnesium-transporting ATPase signature 841 857 IPR006415 GO:0015444|GO:0015693|GO:0016021
Gma05g01738 973 PRINTS Magnesium-transporting ATPase signature 342 358 IPR006415 GO:0015444|GO:0015693|GO:0016021
Gma05g01738 973 PRINTS Magnesium-transporting ATPase signature 876 897 IPR006415 GO:0015444|GO:0015693|GO:0016021
Gma05g01738 973 PRINTS Magnesium-transporting ATPase signature 926 947 IPR006415 GO:0015444|GO:0015693|GO:0016021
Gma05g01738 973 PRINTS Magnesium-transporting ATPase signature 821 834 IPR006415 GO:0015444|GO:0015693|GO:0016021
Gma05g01738 973 PRINTS Magnesium-transporting ATPase signature 359 378 IPR006415 GO:0015444|GO:0015693|GO:0016021
Gma05g01738 973 SUPERFAMILY Calcium ATPase, transduction domain A 223 328 IPR008250 -
Gma05g01738 973 Gene3D - 441 617 IPR023299 GO:0000166
Gma05g01738 973 SUPERFAMILY HAD-like 604 761 IPR036412 -
Gma05g01738 973 TIGRFAM ATPase-IIIB_Mg: magnesium-translocating P-type ATPase 119 972 IPR006415 GO:0015444|GO:0015693|GO:0016021
Gma05g01738 973 Pfam E1-E2 ATPase 223 408 - -
Gma05g01738 973 Gene3D - 426 750 IPR023214 -
Gma05g01738 973 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 678 792 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Gma05g01738 973 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 182 471 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Gma05g01738 973 SUPERFAMILY Calcium ATPase, transmembrane domain M 120 970 IPR023298 -
Gma05g01738 973 PANTHER MAGNESIUM-TRANSPORTING ATPASE, P-TYPE 1 73 972 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g01738 Gma-Chr5 38998115 39003439 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g01738 121 878 Primary Pumps ATPases(2) AT1G10130 26.279 5.64e-68 244
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g01738 K01531 - gmx:100795153 1888.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g01738 05 38998115 39003439 Gma08g01225 08 10384977 10389660 GST