Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g01728 atgtcgaaaccctggggcaacatcggagcctgggccgccgattccgaacgggccgaggccgaggaggctgaggcccaggctgcggccgcggcggtcgagccccaaagctttcccagcctcaaggaggccgtgaactccaagcccaagaagaagaagggaaccaccatcacgctttccgagttcaaccgtggcggtttcgaccagggccttacgcgtgacgagatgctcgcccttcccaccggtcccaaggagcgttccgccgatgaaatgccgttcaaccgccttggcggcggtttctcctcctatgaccgctccggcggtcgctcgcgcgaccgagatggcggcaacaacgaaggttcgtggggcggaggaggcagaagatcctacggcggattcgacgaggagcgcaggggtccgaatcctagggtTTCGGAACTCGATCAGCCGTCCAGGGCTGATGAGGTTGATAATTGGGCGTCTGTGAAGAAATCTCTCCCTGCCTTCGATTCCGGTCGCCAGAATCGCTTTGGTGGCGGCGGTTAtggcggttctggtggtggcggttttggtggcggcggcggcggtggcggttttggtggtgCGTCTAGGGCTGATGATGTGGACAGTTGGGCGGCTGGTAAGAAGCCTGTTCCTGTTAGATCTTCCAATTTCGGTTCTGGTTTTCGCGATTCCGGAGTGGAGCCTGATCGGTGGACGAGAGGCGGTCCGCCGCGTGAGGTTGACCGGACGGAGCGACCGAGGCTGGTGTTAGATCCGCCACGAGGCGATGGTGTGGTGAACGAGTCTCCGGTGAAGGCATCGAATAAGGCAAATCCGTTTGGCGCGGCGAGGCCGCGGGAGCAGGTGTTGGCTGAAAAGGGTTTGGATTGGAAAAAGATGGATTCGGAGATTGAGACGAAGAAGACGAGCCGTCCCCCGAGTTCGCACTCTAGCAGGCCTTCAAGTGCTCAGTCCAATCGCTCTGAGGGTCCCGGGTTGCAGGGGACCGATGCTGTGGTGAAATCGAGGCCCAAGGTGAACCCCTTTGGGGATGCCAAGCCTAGAGAGGCTGTGCTGGGCGAGCGAGGCATGGATTGGAGGAAAATTGATCTTGAATTGGAGCATCGCTCTGTTGACAGgcctgaGACAATGGAGGAAAAATTATTAAAAGAAGAAATTGATAATTTAAAGAAAGAACTTGAGAAAGAGTCTACAATAAATTCAAACAAGGAATCTGTGGATGAGGCTGGTGGAGACCAAACCAGTACACATGCAATATTACAACAGAAAGAAAAGGAGCTGGAACTTCTTATCCGTGATTTGGACGACAAAGTTCGTTTTGGGCAGAAAGCCATTGAAAGGCCAGGTTCATCGGCAGGAAAGTCTTCTACTTTTTCTGATAGGCCACATTCTAGATCTGGCTCCTTTGAGGATTCTAGAAGTGTGGATTTTACAGACAGACCTCGATCTCGTGGTACAGGAGATATGTGGATGCATCCTAGTGATGACAGAAGACAGTTTCAAGGTAGCAGGGAAAGGGGATGGTTTTCTGGCAGCCGAGACTTGAATAGGTCAACGTCAAGAGAGAGATGGTGA 1596 0.3515 MSKPWGNIGAWAADSERAEAEEAEAQAAAAAVEPQSFPSLKEAVNSKPKKKKGTTITLSEFNRGGFDQGLTRDEMLALPTGPKERSADEMPFNRLGGGFSSYDRSGGRSRDRDGGNNEGSWGGGGRRSYGGFDEERRGPNPRVSELDQPSRADEVDNWASVKKSLPAFDSGRQNRFGGGGYGGSGGGGFGGGGGGGGFGGASRADDVDSWAAGKKPVPVRSSNFGSGFRDSGVEPDRWTRGGPPREVDRTERPRLVLDPPRGDGVVNESPVKASNKANPFGAARPREQVLAEKGLDWKKMDSEIETKKTSRPPSSHSSRPSSAQSNRSEGPGLQGTDAVVKSRPKVNPFGDAKPREAVLGERGMDWRKIDLELEHRSVDRPETMEEKLLKEEIDNLKKELEKESTINSNKESVDEAGGDQTSTHAILQQKEKELELLIRDLDDKVRFGQKAIERPGSSAGKSSTFSDRPHSRSGSFEDSRSVDFTDRPRSRGTGDMWMHPSDDRRQFQGSRERGWFSGSRDLNRSTSRERW 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g01728 531 Coils Coil 13 33 - -
Gma05g01728 531 MobiDBLite consensus disorder prediction 449 531 - -
Gma05g01728 531 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B 1 531 IPR010433 GO:0003743
Gma05g01728 531 MobiDBLite consensus disorder prediction 471 510 - -
Gma05g01728 531 MobiDBLite consensus disorder prediction 400 427 - -
Gma05g01728 531 MobiDBLite consensus disorder prediction 129 158 - -
Gma05g01728 531 Coils Coil 386 406 - -
Gma05g01728 531 MobiDBLite consensus disorder prediction 233 258 - -
Gma05g01728 531 MobiDBLite consensus disorder prediction 289 312 - -
Gma05g01728 531 MobiDBLite consensus disorder prediction 410 425 - -
Gma05g01728 531 Coils Coil 424 444 - -
Gma05g01728 531 MobiDBLite consensus disorder prediction 456 470 - -
Gma05g01728 531 MobiDBLite consensus disorder prediction 313 332 - -
Gma05g01728 531 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B1 1 531 - -
Gma05g01728 531 Pfam Plant specific eukaryotic initiation factor 4B 1 514 IPR010433 GO:0003743
Gma05g01728 531 MobiDBLite consensus disorder prediction 1 359 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g01728 Gma-Chr5 38914067 38919586 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g01728 1 531 Eukaryotic Initiation Factors Gene Family AT3G26400 55.476 1.15e-154 451
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g01728 - - gmx:100784238 912.909
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g01728 05 38914067 38919586 Gma08g01214 08 10310097 10315086 GST